DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15408 and hmit-1.3

DIOPT Version :9

Sequence 1:NP_608767.1 Gene:CG15408 / 33548 FlyBaseID:FBgn0031523 Length:466 Species:Drosophila melanogaster
Sequence 2:NP_497725.2 Gene:hmit-1.3 / 175458 WormBaseID:WBGene00010811 Length:604 Species:Caenorhabditis elegans


Alignment Length:599 Identity:114/599 - (19%)
Similarity:209/599 - (34%) Gaps:196/599 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 LINVISISHGIGIGWLSPTLRKLQSDSPAGFEVKSEFEISWVGSMLGMGSVTGNILIG------- 83
            ::.|..::.|.|.|...|:     ||...|          |...||...:|.|..|.|       
 Worm     1 MVQVAPVAAGAGSGQTRPS-----SDPKTG----------WFVYMLAFSAVIGGFLFGYDTGIVS 50

  Fly    84 ------------------------------CLLGR---------LGSKRCLLLIAIPHSCFWILV 109
                                          ..:|.         ||.|:.::..::..:...|:.
 Worm    51 AAMLYVPNASGIKPLDSVWQEIIVSITPGVAAIGSLCSGPGSDFLGRKKIIIGASVTFTIGAIIC 115

  Fly   110 YFAQSVEYLYVGRLLAGICGGGMYIVHPILLSEIADANIRGTFSAMVMLSVNVGILVGYIIGTHL 174
            ..|.:...|.:||:|.|:..|...::.||.:||.:.::|||.......|.:.||:::..|||...
 Worm   116 AAAWTKIILLIGRILLGLAIGFASMIVPIYVSEASPSHIRGKLVTGFQLMITVGLVIANIIGGAF 180

  Fly   175 PY-------YSIPLMVLILPLWYLISVLLFIKESPMHLIRIGK-YSAAERSFRYYKNIKDSDNIH 231
            .|       :.:......:|........||:.|||..|...|: ..|.|...|.|       |.|
 Worm   181 SYVDPDQVGWRLMFAFAAVPAIIQFVCFLFLPESPRWLYEHGRTVEAREVLTRIY-------NGH 238

  Fly   232 DQNRAMEEFEIMKIALTKGDALQDAVTFKDFYSRPALKAYGPALV-----------------LLI 279
            .:   ..::||.:|:.:..:.|:         ::......||.::                 |.:
 Worm   239 TE---WVDYEINEISFSYEEELR---------AKAEHAGNGPTIIRILKTPHVRKAMIIGSLLQM 291

  Fly   280 ANQFSGLFTMVNYMSDIFANSGSTMDPDTCTIIIG--AVQILGTYVTTLLCDICGRKLLMLVSTG 342
            ..|.||:.|::.|..:|..::|...:..|..|.:|  |:..|||::...|.:..||::|:|||..
 Worm   292 FQQLSGINTVMYYTGNIIRSAGVKDNHTTIWISVGTSAINFLGTFIPIALVERVGRRVLLLVSMI 356

  Fly   343 GVAISLTAFGF-----------------FT--------------KYAE----------------- 359
            ||.:.|.|.|.                 :|              ||:.                 
 Worm   357 GVILFLIAMGVSFLLINNDSLRTFDQQNYTLNYNPSVKHAAKCLKYSNCDFCVTDENCGFCESKV 421

  Fly   360 ----------------------------SHNIGEYSW-----------IPLLLMSMDIFLGNIGL 385
                                        ::|..::.|           :|:::|...:...:.|.
 Worm   422 AKKGYCLPFPSDDSSDYSATGICEFSNLTNNGTDFEWEDTYCHTKFTVLPIIIMVFYLLSFSAGY 486

  Fly   386 VGCFFVSLVEMFPVKIRAKAASMAIVVCSIFVFLMLNIFPICMKQWGIS-ATMWSCAGVTALSSL 449
            ....:|...|.:|:..|:.|.|:: ..|:....|::::..:.:.|.... .|.:...|.|.::.:
 Worm   487 APLPWVLNAEFYPLWARSTAVSVS-TACNWIFNLIVSLTFLSLSQAATKYGTFFIYCGCTMVALV 550

  Fly   450 YFTYFMKETKGKSM 463
            :..:|:.||||.|:
 Worm   551 FVFFFVPETKGYSI 564

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15408NP_608767.1 2A0115 17..410 CDD:273327 102/543 (19%)
MFS 60..455 CDD:119392 100/555 (18%)
hmit-1.3NP_497725.2 MFS 34..558 CDD:421695 98/543 (18%)
MFS <190..>249 CDD:421695 16/68 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158043
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53651
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.750

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