DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3285 and VBA3

DIOPT Version :9

Sequence 1:NP_001285583.1 Gene:CG3285 / 33547 FlyBaseID:FBgn0031522 Length:466 Species:Drosophila melanogaster
Sequence 2:NP_009864.1 Gene:VBA3 / 850290 SGDID:S000000574 Length:458 Species:Saccharomyces cerevisiae


Alignment Length:362 Identity:69/362 - (19%)
Similarity:117/362 - (32%) Gaps:120/362 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 VEFLYIGRLMAGITGGA----CYVVLPTFISEIADTNVRGRLGSIILLSVNTGVLAGYIVSTRVD 180
            :..|.:||::|.:.|..    |:|:..|.:.|.:...|...|.....::...|.:.|...:|.|.
Yeast     1 MNMLIVGRVVASVGGSGLQTLCFVIGCTMVGERSRPLVISILSCAFAVAAIVGPIIGGAFTTHVT 65

  Fly   181 -----YFTSPPFIIGLPVCYFICNFLIPETPHHLVRKGKFEAAKRSFMFYKNIRKNDIKAEDEFE 240
                 |...|  |.||.:..|:..:                                 |||:   
Yeast    66 WRWCFYINLP--IGGLAIIMFLLTY---------------------------------KAEN--- 92

  Fly   241 EMKYLL--IKEQTEKAKSFDYRDFITRPAFKAYASAAVLLISNQFSASFC----VTTYLADVFAA 299
              |.:|  ||:......||.:..|..:..||...: .::...:.|..:.|    |...|...|..
Yeast    93 --KGILQQIKDAIGTISSFTFSKFRHQVNFKRLMN-GIIFKFDFFGFALCSAGLVLFLLGLTFGG 154

  Fly   300 SHTTLNLG--MCTIIIGVLQ--------------------------------------IVGNYVT 324
            :..:.|.|  :..:::|||.                                      |:.|.||
Yeast   155 NKYSWNSGQVIAYLVLGVLLFIFSLVYDFFLFDKFNPEPDNISYRPLLLRRLVAKPAIIIINMVT 219

  Fly   325 TLLCDKYGRRILMLTSTLGASVCLTAFGTFTFFAEAADLSSVDWLPLVILSCFVFLCN------I 383
            .|||..|.          |..:....|... .||.:|..:.:..:|:||.:....:.:      :
Yeast   220 FLLCTGYN----------GQMIYSVQFFQL-IFASSAWKAGLHLIPIVITNVIAAIASGVITKKL 273

  Fly   384 GLV-------GCLFVVLVELFPAKIRSVSVSTFVVIL 413
            |||       |.|.|:...|......:.:.||.:.:|
Yeast   274 GLVKPLLIFGGVLGVIGAGLMTLMTNTSTKSTQIGVL 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3285NP_001285583.1 MFS 29..443 CDD:119392 69/362 (19%)
MFS_1 32..419 CDD:284993 69/362 (19%)
VBA3NP_009864.1 MFS <1..369 CDD:421695 69/362 (19%)
MFS <1..>181 CDD:421695 43/220 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.