DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3285 and MSS1

DIOPT Version :9

Sequence 1:NP_001285583.1 Gene:CG3285 / 33547 FlyBaseID:FBgn0031522 Length:466 Species:Drosophila melanogaster
Sequence 2:NP_198006.1 Gene:MSS1 / 832703 AraportID:AT5G26340 Length:526 Species:Arabidopsis thaliana


Alignment Length:406 Identity:93/406 - (22%)
Similarity:160/406 - (39%) Gaps:78/406 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 IGRKMVLFFIAIPYTTFWCLIYFVQSVEFLYIGRLMAGITGGACYVVLPTFISEIADTNVRGRLG 158
            :||::.:....:.:.....|....|.:..|..||::.|...|.....:|.|:||||.|.:||.|.
plant   108 LGRRLTMLIAGVFFIIGVALNAGAQDLAMLIAGRILLGCGVGFANQAVPLFLSEIAPTRIRGGLN 172

  Fly   159 SIILLSVNTGVLAGYIVSTRVDYFTS----------PPFIIGLPVCYF-ICNFLIPETPHHLVRK 212
            .:..|:|..|:|    .:..|:|.|:          ...:.|:|.... :...|:.|||:.||.:
plant   173 ILFQLNVTIGIL----FANLVNYGTAKIKGGWGWRLSLGLAGIPALLLTVGALLVTETPNSLVER 233

  Fly   213 GKFEAAKRSFMFYKNIRKNDIKAEDEFEEMKYLLIKEQTEKAKSFDYRDFITRPAFKAYASAAVL 277
            |:.:..|   ...:.||..| ..|.||.:   ||...:..|.....:|:.:.|........|..|
plant   234 GRLDEGK---AVLRRIRGTD-NVEPEFAD---LLEASRLAKEVKHPFRNLLQRRNRPQLVIAVAL 291

  Fly   278 LISNQFSASFCVTTYLADVFAASHTTLNLG-----MCTIIIGVLQIVGNYVTTLLCDKYGRRILM 337
            .|..|.:....:..|...:|    :||..|     ...::.|.:.::...|:....||.|||:|:
plant   292 QIFQQCTGINAIMFYAPVLF----STLGFGSDASLYSAVVTGAVNVLSTLVSIYSVDKVGRRVLL 352

  Fly   338 LTSTLGASVCLTAFGTFTFFAE--------------AADLSSVDWLPLVILSC---FVFLCNIGL 385
            |.:           |...||::              :.:||....:.:|::.|   ..|..:.|.
plant   353 LEA-----------GVQMFFSQVVIAIILGVKVTDTSTNLSKGFAILVVVMICTYVAAFAWSWGP 406

  Fly   386 VGCLFVVLVELFPAKIRSVSVSTFVVILSSTVFLTLKIF--PICMAVWGTSVTMWSCSGITFFS- 447
            :|  :::..|.||.:.||...|..|.:.....|:..:.|  .:|...:|..:         ||| 
plant   407 LG--WLIPSETFPLETRSAGQSVTVCVNLLFTFIIAQAFLSMLCHFKFGIFI---------FFSA 460

  Fly   448 -----FLYFCFFLEET 458
                 .::..|.|.||
plant   461 WVLIMSVFVMFLLPET 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3285NP_001285583.1 MFS 29..443 CDD:119392 86/383 (22%)
MFS_1 32..419 CDD:284993 82/357 (23%)
MSS1NP_198006.1 MFS_STP 29..475 CDD:340919 91/403 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53651
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X26
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.830

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