DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3285 and AT5G18840

DIOPT Version :9

Sequence 1:NP_001285583.1 Gene:CG3285 / 33547 FlyBaseID:FBgn0031522 Length:466 Species:Drosophila melanogaster
Sequence 2:NP_568367.1 Gene:AT5G18840 / 832002 AraportID:AT5G18840 Length:482 Species:Arabidopsis thaliana


Alignment Length:451 Identity:108/451 - (23%)
Similarity:208/451 - (46%) Gaps:43/451 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 TLLLNIATFSHGLGVGWMSPVMRDLQTDESPLDFPVLVSQVSWIGSLVGIGSVMGNLIAGLLMDR 93
            |.:....:|..|..||:.:|....::.     |..:.:::.|..||::.||:::|.:::|.:.|.
plant    48 TFVAVCGSFEFGSCVGYSAPTQSSIRQ-----DLNLSLAEFSMFGSILTIGAMLGAVMSGKISDF 107

  Fly    94 IGRKMVLFFIAIPYTTFWCLIYFVQSVEFLYIGRLMAGITGGACYVVLPTFISEIADTNVRGRLG 158
            .|||..:...|....|.|..::|.:....|.:||...|...|....|:|.:|:||:..|:||.|.
plant   108 SGRKGAMRTSACFCITGWLAVFFTKGALLLDVGRFFTGYGIGVFSYVVPVYIAEISPKNLRGGLT 172

  Fly   159 SIILLSVNTGVLAGYIVSTRVDYFTSPPFIIGLPVC----YFICNFLIPETPHHLVRKG---KFE 216
            ::..|.:..|....:::.:.:.:.|..  :.||..|    :.:|  .|||:|..|.:.|   :|.
plant   173 TLNQLMIVIGSSVSFLIGSLISWKTLA--LTGLAPCIVLLFGLC--FIPESPRWLAKAGHEKEFR 233

  Fly   217 AAKRSFMFYKNIRKNDIKAEDEFEEMKY-LLIKEQTEKAKSFDYRDFITRPAFKAYASAAVLLIS 280
            .|      .:.:|..|....:|.:.::. :...|...||:   .:|.:::...::......|::.
plant   234 VA------LQKLRGKDADITNEADGIQVSIQALEILPKAR---IQDLVSKKYGRSVIIGVSLMVF 289

  Fly   281 NQFSASFCVTTYLADVFA-ASHTTLNLGMCTIIIGVLQIVGNYVTTLLCDKYGRRILMLTSTLGA 344
            .||.....:..|.::.|. |..|:..||  ||.|..:|:....:.|:|.||.|||.|::.|..|.
plant   290 QQFVGINGIGFYASETFVKAGFTSGKLG--TIAIACVQVPITVLGTILIDKSGRRPLIMISAGGI 352

  Fly   345 SVCLTAFGTFTFFAEAADLSSVDWLP-------LVILSCFVFLCNIGLVGCLFVVLVELFPAKIR 402
            .:.....|| :|..:...| .::|:|       |:.::.|    :||:....:|::.|:||..::
plant   353 FLGCILTGT-SFLLKGQSL-LLEWVPSLAVGGVLIYVAAF----SIGMGPVPWVIMSEIFPINVK 411

  Fly   403 SVSVSTFVVILSSTVFLTLKIFPICMAVWGTSVTMWSCSGITFFSFLYFCFFLEETNGKSL 463
            .::.|..|::..|..:.....|...|: |.:..|.:..|.....:.::....:.||.||:|
plant   412 GIAGSLVVLVNWSGAWAVSYTFNFLMS-WSSPGTFYLYSAFAAATIIFVAKMVPETKGKTL 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3285NP_001285583.1 MFS 29..443 CDD:119392 103/429 (24%)
MFS_1 32..419 CDD:284993 97/402 (24%)
AT5G18840NP_568367.1 MFS_GLUT6_8_Class3_like 45..473 CDD:340916 108/451 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53651
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48021
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X26
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.930

Return to query results.
Submit another query.