DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3285 and AT4G04760

DIOPT Version :9

Sequence 1:NP_001285583.1 Gene:CG3285 / 33547 FlyBaseID:FBgn0031522 Length:466 Species:Drosophila melanogaster
Sequence 2:NP_001319869.1 Gene:AT4G04760 / 825812 AraportID:AT4G04760 Length:478 Species:Arabidopsis thaliana


Alignment Length:457 Identity:115/457 - (25%)
Similarity:201/457 - (43%) Gaps:49/457 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 LVTLLLNIATFSHGLGVGWMSP----VMRDLQTDESPLDFPVLVSQVSWIGSLVGIGSVMGNLIA 87
            |..::.:...|:.|..:|:.:|    :|:||.         :.::..|..||::.:|.::|.||.
plant    33 LAFIVGSCGAFAFGCIIGYSAPTQTSIMKDLN---------LSIADYSLFGSILTVGLILGALIC 88

  Fly    88 GLLMDRIGRKMVLFFIAIPYTTFWCLIYFVQSVEFLYIGRLMAGITGGACYVVLPTFISEIADTN 152
            |.|.|.:||...::...|.:...|..|.|.:.|..|.:|||:.||:.|....:.|.:|:|||..|
plant    89 GKLTDLVGRVKTIWITNILFVIGWFAIAFAKGVWLLDLGRLLQGISIGISVYLGPVYITEIAPRN 153

  Fly   153 VRGRLGSIILLSVNTGVLAGYIVSTRVDY-----FTSPPFIIGLPVCYFICNFLIPETPHHLVRK 212
            :||...|...|....|:...|.:.|.|.:     ....|.::.||:.:|     |||:|..|.:.
plant   154 LRGAASSFAQLFAGVGISVFYALGTIVAWRNLAILGCIPSLMVLPLLFF-----IPESPRWLAKV 213

  Fly   213 GKFEAAKRSFMFYKNIRKNDIKAEDEFEEMKYLLIKEQTEKAKSFDYRDFITRPAFKAY------ 271
            |: |....:.:......|:|:  .||..|     |.|.||..|  ..:|...|..||.:      
plant   214 GR-EMEVEAVLLSLRGEKSDV--SDEAAE-----ILEYTEHVK--QQQDIDDRGFFKLFQRKYAF 268

  Fly   272 --ASAAVLLISNQFSASFCVTTYLADVFAASHTTLNLGMCTIIIGVLQIVGNYVTTLLCDKYGRR 334
              ....||:...|.......:.|...:|.::..:.:.|.  |...|:|:.|..:.|:|.|..|||
plant   269 SLTIGVVLIALPQLGGLNGYSFYTDSIFISTGVSSDFGF--ISTSVVQMFGGILGTVLVDVSGRR 331

  Fly   335 ILMLTSTLGASV-CLTAFGTFTFFAEAADLSSVDWLPLVILSCFVFLCNIGL-VGCL-FVVLVEL 396
            .|:|.|..|..: |||.  ..:||.:...........|.:.|..|:..:.|. :|.: :::..|:
plant   332 TLLLVSQAGMFLGCLTT--AISFFLKENHCWETGTPVLALFSVMVYFGSYGSGMGSIPWIIASEI 394

  Fly   397 FPAKIRSVSVSTFVVILSSTVFLTLKIFPICMAVWGTSVTMWSCSGITFFSFLYFCFFLEETNGK 461
            :|..::..:.:...::.|.:.:|....|...:. |.::.|....:.:....|::....:.||.||
plant   395 YPVDVKGAAGTMCNLVSSISAWLVAYSFSYLLQ-WSSTGTFLMFATVAGLGFVFIAKLVPETKGK 458

  Fly   462 SL 463
            ||
plant   459 SL 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3285NP_001285583.1 MFS 29..443 CDD:119392 107/433 (25%)
MFS_1 32..419 CDD:284993 103/406 (25%)
AT4G04760NP_001319869.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53651
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48021
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X26
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.930

Return to query results.
Submit another query.