DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG3285 and AT3G19940

DIOPT Version :9

Sequence 1:	NP_001285583.1	Gene:	CG3285 / 33547	FlyBaseID:	FBgn0031522	Length:	466	Species:	Drosophila melanogaster
Sequence 2:	NP_188628.1	Gene:	AT3G19940 / 821532	AraportID:	AT3G19940	Length:	514	Species:	Arabidopsis thaliana

Alignment Length:	484	Identity:	118/484 - (24%)
Similarity:	205/484 - (42%)	Gaps:	103/484 - (21%)

- Green bases have known domain annotations that are detailed below.

  Fly    37 FSHGLGVGWMSPVMRDLQTDESPLDFPVLVSQVS------------------WIGSLVGIGSVMG 83
            |.:.||:......|.:..|.    .||.:.||:.                  :..||. :.:::.
plant    39 FGYDLGISGGVTSMEEFLTK----FFPQVESQMKKAKHDTAYCKFDNQMLQLFTSSLY-LAALVA 98

  Fly    84 NLIAGLLMDRIGRKMVLFFIAIPYTTFWCLIYFVQSVEFLYIGRLMAGITGGACYVVLPTFISEI 148
            :.:|.::..:.|||:.:|...:.:........|..:|..|.||||:.|:..|......|.::||:
plant    99 SFMASVITRKHGRKVSMFIGGLAFLIGALFNAFAVNVSMLIIGRLLLGVGVGFANQSTPVYLSEM 163

  Fly   149 ADTNVRGRLGSIILLSVNTGVLAGYIVSTRVDYFTSP------PFIIGL----PVCYFICNFLIP 203
            |...:||.|.....:::..|:|    |:..::|.||.      ...:||    .|...|.:|::|
plant   164 APAKIRGALNIGFQMAITIGIL----VANLINYGTSKMAQHGWRVSLGLAAVPAVVMVIGSFILP 224

  Fly   204 ETPHHLVRKGKFEAAKRSFMFYKNIRKNDIKAEDEFEEMKYLLIKEQTEKAKSFD--YRDFIT-- 264
            :||:.::.:||.|.||:   ..|.||..| ..:.||::     :.:..|.||..:  :::.:.
plant   225 DTPNSMLERGKNEEAKQ---MLKKIRGAD-NVDHEFQD-----LIDAVEAAKKVENPWKNIMESK 280

  Fly   265 -RPAFKAYASAAVLLISNQFSASFCVTTYLADVFAASHTTLNLG-----MCTIIIGVLQIVGNYV 323
             |||. .:.||  :....|.:....:..|...:|    .||..|     |..:|.||:.::..:|
plant   281 YRPAL-IFCSA--IPFFQQITGINVIMFYAPVLF----KTLGFGDDAALMSAVITGVVNMLSTFV 338

  Fly   324 TTLLCDKYGRRILMLTSTLGASVCLTAFGTF------TFFAEAADLSSVDWLPLVILSCFV--FL 380
            :....|:||||:|.|...:...:|....|:|      |........::.||: |..:..:|  |.
plant   339 SIYAVDRYGRRLLFLEGGIQMFICQLLVGSFIGARFGTSGTGTLTPATADWI-LAFICVYVAGFA 402

  Fly   381 CNIGLVGCLFVVLVELFPAKIR------SVSVSTFVVILSSTVFLTLKIFPICMAVWGTSVTMWS 439
            .:.|.:|  ::|..|:.|.:||      :|||:.|...|....|||:    :|...:|.
plant   403 WSWGPLG--WLVPSEICPLEIRPAGQAINVSVNMFFTFLIGQFFLTM----LCHMKFGL------ 455

  Fly   440 CSGITFFS--------FLYFCFFLEETNG 460
               ..||:        |:|  |.|.||.|
plant   456 ---FYFFASMVAIMTVFIY--FLLPETKG 479

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG3285	NP_001285583.1	MFS	29..443	CDD:119392	109/457 (24%)
CG3285	NP_001285583.1	MFS_1	32..419	CDD:284993	104/433 (24%)
AT3G19940	NP_188628.1	Sugar_tr	29..489	CDD:278511	118/484 (24%)
AT3G19940	NP_188628.1	MFS	79..475	CDD:119392	105/434 (24%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0254
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG53651
OrthoDB	1	1.010	-	-		D430696at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X26
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	6	5.830