DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3285 and slc2a12

DIOPT Version :9

Sequence 1:NP_001285583.1 Gene:CG3285 / 33547 FlyBaseID:FBgn0031522 Length:466 Species:Drosophila melanogaster
Sequence 2:NP_956832.1 Gene:slc2a12 / 393510 ZFINID:ZDB-GENE-040426-1513 Length:610 Species:Danio rerio


Alignment Length:570 Identity:122/570 - (21%)
Similarity:208/570 - (36%) Gaps:175/570 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 LVTLLLNIATFSHGLGVGW-MSPV------MRDLQTDESPLDFPVLVSQVSWIGSLVGIGSVMGN 84
            ||...:::|..| ||.:|: ||.:      :||:.|...|       .|...:|||: :|:.:.:
Zfish    43 LVLCSVSVACLS-GLLMGYEMSLISGALLQLRDVLTLSCP-------EQEQVVGSLL-LGAFLLS 98

  Fly    85 LIAGLLMDRIGRKMVLF----------FIAIPYTTFWCLIYFVQSVEFLYIGRLMAGITGGACYV 139
            |..|.::|..||:..:.          .:::...:||.|:          :||::.|::......
Zfish    99 LGGGTILDHYGRRFTIILTALLCVLGTLLSVCVVSFWALV----------VGRMLVGMSVALSGT 153

  Fly   140 VLPTFISEIADTNVRGRLGSIILLSVNTGVLAGYIVSTRVDYFTSPP----FIIG---------- 190
            ....:.:|:|....|||...:..|.|..|:|.|:.:|..   |...|    |..|          
Zfish   154 ASCLYAAEVAPAAWRGRCVCVYELMVVLGMLLGFGLSWA---FAGVPDGWRFTFGGALLPALLQA 215

  Fly   191 --LPVCYFICNFLIPETPHHLVRKGKFEAAKRSFMFYKNIRKNDIKAEDEFEEMKYLLIKEQTEK 253
              :|        |:|::|..|:.:.:.:.|..:.:..:...|.....|||...::..:..|:...
Zfish   216 GVMP--------LLPDSPRFLLAQQREKEAHATLLRLRAGIKEVEPVEDELRAIRLAMGAERLHG 272

  Fly   254 -AKSFDYRDFITRPAFKAYASAAVLLISNQFSASFCVTTYLADVFAA--SHTTLNLGMCTIIIGV 315
             ...|..||.:    .:.....|.|:...|.:....:..|.:.|.::  .|......:.:...||
Zfish   273 FLDLFQSRDNM----LQRLLVGAALVFLQQATGQPNILAYASTVLSSVGFHGNEAATLASTGFGV 333

  Fly   316 LQIVGNYVTTLLCDKYGRR--------ILML-TSTLGA----------SVCLTAFGT--FTFF-- 357
            :::.|......|.||.|.:        ::|| |:||||          |:|.....|  ||.|  
Zfish   334 VKVGGTIPAIFLVDKVGPKALLCVGVVVMMLSTATLGAITMQSRTHVSSLCRGPGNTANFTLFET 398

  Fly   358 -------------------------------------------------AEAADLS--------- 364
                                                             .|.|:||         
Zfish   399 GDETDIQTNTPLGLYQPQNKLKTNAFLTSINDTREHWILNHTYDHRTALIETAELSKKDSAKIAL 463

  Fly   365 --------SVDWLPLVILSCFVFLCNIGLVGCLFVVLVELFPAKIRSVSVSTFVV------ILSS 415
                    |:.|:.||.|..:|...:|.|...:.|||..:||..||..:||....      :|.|
Zfish   464 QSLHEVSPSLKWISLVSLLVYVAGFSISLGPMVHVVLSAIFPTGIRGKAVSVISAFNWATNLLIS 528

  Fly   416 TVFLTL--KIFPICMAVWGTSVTMWSCSGITFFSFLYFCFFLEETNGKSL 463
            ..||||  :|        |....::|.|.::|...::...|:.||.|:||
Zfish   529 MTFLTLTERI--------GLPTVIFSYSAMSFLLVVFVIVFVPETKGRSL 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3285NP_001285583.1 MFS 29..443 CDD:119392 113/546 (21%)
MFS_1 32..419 CDD:284993 105/517 (20%)
slc2a12NP_956832.1 MFS 48..395 CDD:119392 80/380 (21%)
SP 49..573 CDD:273317 120/564 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170577139
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53651
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.850

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