DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3285 and hmit-1.2

DIOPT Version :9

Sequence 1:NP_001285583.1 Gene:CG3285 / 33547 FlyBaseID:FBgn0031522 Length:466 Species:Drosophila melanogaster
Sequence 2:NP_507624.1 Gene:hmit-1.2 / 180206 WormBaseID:WBGene00013074 Length:613 Species:Caenorhabditis elegans


Alignment Length:571 Identity:124/571 - (21%)
Similarity:202/571 - (35%) Gaps:159/571 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 FLVTLLLN---IATFSHGLGVGWMSPVMRDLQTDESPLDFPVLVSQVSWIGSLVGIG---SVMGN 84
            |.|.||.:   |..|..|.....:|..|  |...|:|...|:   ...|...:|.|.   :.:|.
 Worm    24 FFVYLLGSAAIIGGFLFGYDTSVVSAAM--LYVPEAPGLKPM---GTVWKEVIVSITPGMAAVGA 83

  Fly    85 LIAGLLMDRIGRKMV-----LFFI--AIPYTTFWCLIYFVQSVEFLYIGRLMAGITGGACYVVLP 142
            ..:|...||.|||.:     |.|:  |:.....|..|       .:.|||:..|:..|...:|:|
 Worm    84 WFSGAGSDRYGRKPIIIGSTLIFVCGAVICAVAWTKI-------VMLIGRIFLGVGIGFASMVVP 141

  Fly   143 TFISEIADTNVRGRLGSIILLSVNTGVLAGYIVSTRVDYFTSPPFIIGLPVCY----------FI 197
            .::.|.:.|:|||.|.|...:.::.|.:...|:.....|:  .|:.||..:.:          |:
 Worm   142 VYLGEASPTHVRGTLVSAFAMMISFGQVVANIMGGVFSYW--EPYTIGWRLMFAFAGIPALIQFV 204

  Fly   198 CNFLIPETPHHLVRKGKFEAAKRSFMFYKNIRKNDIKAEDEFEEMKYLLIK-----EQTEKAKSF 257
            |...:||||..|...|..|.|::  :..|....|....|.|..|:|....:     |:.:|:...
 Worm   205 CFIFLPETPRWLYENGHTEQAEQ--VLEKIYGGNTEWIEYELAEIKTYAEERQKQMEEEKKSGPV 267

  Fly   258 DYRDFITRPAFKAYASAAVLLISNQFSASFCVTTYLADVFAAS-----HTTLNLGMCTIIIGVLQ 317
            .:|...|....||....::|....|.:....:..|.||:..::     ||.:   ..::|:.:..
 Worm   268 IWRILKTPHVLKACFIGSMLQAFQQLAGINTILYYTADIIRSAGIENYHTII---WISVILSICN 329

  Fly   318 IVGNYVTTLLCDKYGRRILMLTSTLGASVCLTAFG------------------------------ 352
            ::|.:......:|.|||.|.|.|..|..|.|...|                              
 Worm   330 LIGPFAPMFFIEKLGRRKLFLFSCAGVVVSLVLIGVSFLLVGNDSAPNFDRSAYLLAGNYQSNGE 394

  Fly   353 --------------------------TFTFFAEAADLSSVD------------------------ 367
                                      |.|.|....|.:.|.                        
 Worm   395 AESCLMLSNCDSCVTSEHCGFCEDSETRTGFCLPVDHNDVTLYSSTGLCTNGLDKSNSSFPNATS 459

  Fly   368 --W-----------LPLVILSCFVFLCNIGLVGCLFVVLVELFPAKIRS--VSVSTFVVILSSTV 417
              |           ||:|::..::...:.|.....:|:..|.:|...||  ||:||    ||:.|
 Worm   460 YVWQKHHCTTSYTILPIVMMGVYLLTFSCGFTSLPWVLNSEFYPMWARSTCVSIST----LSNWV 520

  Fly   418 F---LTLKIFPICMAV--WGTSVTMWSCSGITFFSFLYFCFFLEETNGKSL 463
            |   :.|....:..|:  :|   ..|..:..|..:|::..|.:.||.|.|:
 Worm   521 FNLIIALTYLSLTHAITKYG---AFWLYAIFTIIAFIFIYFLVPETTGYSI 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3285NP_001285583.1 MFS 29..443 CDD:119392 115/546 (21%)
MFS_1 32..419 CDD:284993 109/517 (21%)
hmit-1.2NP_507624.1 MFS 32..562 CDD:421695 116/555 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158032
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53651
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.760

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