DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3285 and R09B5.11

DIOPT Version :9

Sequence 1:NP_001285583.1 Gene:CG3285 / 33547 FlyBaseID:FBgn0031522 Length:466 Species:Drosophila melanogaster
Sequence 2:NP_503413.2 Gene:R09B5.11 / 178634 WormBaseID:WBGene00019979 Length:516 Species:Caenorhabditis elegans


Alignment Length:494 Identity:114/494 - (23%)
Similarity:200/494 - (40%) Gaps:115/494 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 IATFSHGLGVGWMS---PVMRD-------------LQTDESPLDFPVLVSQVSWIGSLVGIGSVM 82
            :|:|..|..:|.::   |::.|             |...::...:.|.||..|       :|.:.
 Worm    56 LASFQDGFQIGCINAPGPLIIDWIKKCHFELFGEVLSQYQADFIWSVAVSMFS-------VGGMF 113

  Fly    83 GNLIAGLLMDRIGRKMVLFF-------IAIPYTT-----FWCLIYFVQSVEFLYIGRLMAGITGG 135
            |:..:|.|.|:.|||..|.:       .|:..:|     |:.:|.|         ||.:.|:..|
 Worm   114 GSFCSGFLADKFGRKSTLLYNNILALLAAVCLSTSKLFNFYPMIVF---------GRFLVGLNCG 169

  Fly   136 ACYVVLPTFISEIADTNVRGRLGSIILLSVNTGVLAG------YIVSTRVDYFTSPPFIIGLPVC 194
            ....::|.|::|:|..|:||:.||...|:::..::..      .|..|:|.:    |:|.   .|
 Worm   170 ITSGLVPMFLTELAPANLRGKCGSFHQLNISVAIVLSQALGLPQIFGTQVGW----PYIF---AC 227

  Fly   195 YFICNFL----IP---ETPHHLVRK-GKFEAAKRSFMFYKNIRKNDIKAEDEFEEMKYLLIKEQT 251
            ..|..||    ||   |:|.:|:.| ...|.|:|   ..:.:| ...|.::|.|.|    ::|..
 Worm   228 VAIPTFLQLATIPFCVESPKYLISKLNDREEARR---ILEKLR-GHTKVDEELEHM----VQETM 284

  Fly   252 EKAKSFDYRDFITRPAFKA-----YASAAVLLISNQFSASFCVTTYLADVFAASHTTLNLGM-CT 310
            ...:......:::  .||.     ...:.:::.|.|||....||.|...:|..:..:.|..| .|
 Worm   285 VTVEPLHQPGYVS--LFKGDNQWPMIVSILMMFSQQFSGISAVTFYSTLIFKRNGLSGNEPMYAT 347

  Fly   311 IIIGVLQIVGNYVTTLLCD--KYGRRILMLTSTLGASVCLTA-FGTFTFFAEAADLSSVDWLPLV 372
            :..|.::::..:....|.|  |:||:.|.:....|  :|::: ....|.....|......::.::
 Worm   348 VGFGCIKLIATFGCLFLIDHPKFGRKRLHIAGLSG--MCISSILIVITLTLSNAGYHWASYMNVL 410

  Fly   373 ILSCFV--FLCNIGLVGCLFVVLVELFPAKIRSVSVSTFVVILSSTVFLTLKIFPICMAVWGTSV 435
            .:..||  |....|.:...|.  .|||.:..|..:.:  |...|:.|           |.|...:
 Worm   411 FILSFVVTFAFGPGPIPWFFT--SELFDSATRGRAAA--VSATSNWV-----------ANWMVGL 460

  Fly   436 TMWSCSGI---------TFFSFLYFCF---FLEETNGKS 462
            |....:.|         |||:|.:..|   |:.||.|||
 Worm   461 TFLPINNIIHQYAFLMFTFFTFTFAIFTWKFVPETKGKS 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3285NP_001285583.1 MFS 29..443 CDD:119392 102/461 (22%)
MFS_1 32..419 CDD:284993 99/437 (23%)
R09B5.11NP_503413.2 Sugar_tr 54..499 CDD:278511 112/492 (23%)
MFS 90..465 CDD:119392 96/424 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X26
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

Return to query results.
Submit another query.