DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3285 and hmit-1.3

DIOPT Version :9

Sequence 1:NP_001285583.1 Gene:CG3285 / 33547 FlyBaseID:FBgn0031522 Length:466 Species:Drosophila melanogaster
Sequence 2:NP_497725.2 Gene:hmit-1.3 / 175458 WormBaseID:WBGene00010811 Length:604 Species:Caenorhabditis elegans


Alignment Length:556 Identity:119/556 - (21%)
Similarity:206/556 - (37%) Gaps:154/556 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 IATFSHGLGVGWMSPVMRDLQTDE--SPLDFPVLVSQVSWIGSLVGIGSVMGNLIAGLLMDRIGR 96
            |..|..|...|.:|..|..:....  .|||   .|.|...:....|:.:: |:|.:|...|.:||
 Worm    37 IGGFLFGYDTGIVSAAMLYVPNASGIKPLD---SVWQEIIVSITPGVAAI-GSLCSGPGSDFLGR 97

  Fly    97 KMVLFFIAIPYT-------TFWCLIYFVQSVEFLYIGRLMAGITGGACYVVLPTFISEIADTNVR 154
            |.::...::.:|       ..|..|       .|.|||::.|:..|...:::|.::||.:.:::|
 Worm    98 KKIIIGASVTFTIGAIICAAAWTKI-------ILLIGRILLGLAIGFASMIVPIYVSEASPSHIR 155

  Fly   155 GRLGSIILLSVNTGVLAGYIVSTRVDY-------------FTSPPFIIGLPVCYFICNFLIPETP 206
            |:|.:...|.:..|::...|:.....|             |.:.|.||     .|:|...:||:|
 Worm   156 GKLVTGFQLMITVGLVIANIIGGAFSYVDPDQVGWRLMFAFAAVPAII-----QFVCFLFLPESP 215

  Fly   207 HHLVRKGKFEAAKRSFMFYKNIRKNDIKAEDEFEEMKYLLIKEQTEKAKSFD-----YRDFITRP 266
            ..|...|:...|:.......|.....:  :.|..|:.:...:|...||:...     .|...|..
 Worm   216 RWLYEHGRTVEAREVLTRIYNGHTEWV--DYEINEISFSYEEELRAKAEHAGNGPTIIRILKTPH 278

  Fly   267 AFKAYASAAVLLISNQFSASFCVTTYLADVFAA-----SHTTLNLGMCTIIIGVLQIVGNYVTTL 326
            ..||....::|.:..|.|....|..|..::..:     :|||:.:.:.|..|..|   |.::...
 Worm   279 VRKAMIIGSLLQMFQQLSGINTVMYYTGNIIRSAGVKDNHTTIWISVGTSAINFL---GTFIPIA 340

  Fly   327 LCDKYGRRILMLTSTLGASVCLTAFG------------TF------------------------- 354
            |.::.|||:|:|.|.:|..:.|.|.|            ||                         
 Worm   341 LVERVGRRVLLLVSMIGVILFLIAMGVSFLLINNDSLRTFDQQNYTLNYNPSVKHAAKCLKYSNC 405

  Fly   355 -----------------------------------TFFAEAADLSS----VDW-----------L 369
                                               |...|.::|::    .:|           |
 Worm   406 DFCVTDENCGFCESKVAKKGYCLPFPSDDSSDYSATGICEFSNLTNNGTDFEWEDTYCHTKFTVL 470

  Fly   370 PLVILSCFVFLCNIGLVGCLFVVLVELFP--AKIRSVSVST-----FVVILSSTVFLTLKIFPIC 427
            |::|:..::...:.|.....:|:..|.:|  |:..:|||||     |.:|:|.| ||:|.   ..
 Worm   471 PIIIMVFYLLSFSAGYAPLPWVLNAEFYPLWARSTAVSVSTACNWIFNLIVSLT-FLSLS---QA 531

  Fly   428 MAVWGTSVTMWSCSGITFFSFLYFCFFLEETNGKSL 463
            ...:||......|   |..:.::..||:.||.|.|:
 Worm   532 ATKYGTFFIYCGC---TMVALVFVFFFVPETKGYSI 564

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3285NP_001285583.1 MFS 29..443 CDD:119392 112/534 (21%)
MFS_1 32..419 CDD:284993 106/510 (21%)
hmit-1.3NP_497725.2 MFS 34..558 CDD:421695 115/548 (21%)
MFS <190..>249 CDD:421695 14/65 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158033
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53651
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.750

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