DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8837 and ITR1

DIOPT Version :9

Sequence 1:NP_001285582.1 Gene:CG8837 / 33545 FlyBaseID:FBgn0031520 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_010785.1 Gene:ITR1 / 852108 SGDID:S000002905 Length:584 Species:Saccharomyces cerevisiae


Alignment Length:497 Identity:108/497 - (21%)
Similarity:182/497 - (36%) Gaps:88/497 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 GLMFG-----ITPAHMTLYESEERTPLNQATDPAGTAWLTGYLFLSAALGALV----SGFLALKI 83
            |.|||     |:.|.:::....:...|........||        :.:||||:    :|..|...
Yeast    97 GFMFGYDTGYISSALISIGTDLDHKVLTYGEKEIVTA--------ATSLGALITSIFAGTAADIF 153

  Fly    84 GPKSVLLCSGLLQISGWACIHFGYDIVHIYASRLFAGVASGAAFVVLPIFINEIAESREKAARLT 148
            |.|..|:.|.|:.:.|.......:....:...||..|...|...::.|:||:|||....: .|||
Yeast   154 GRKRCLMGSNLMFVIGAILQVSAHTFWQMAVGRLIMGFGVGIGSLIAPLFISEIAPKMIR-GRLT 217

  Fly   149 FTIELWRTLGILIGFVLGFYVPY--------AFVNIVGCAVSFVFTMTFPFVQESPHYYLRKNNM 205
            ....||.|.|.|:.:..|..:.|        ..::::..||.|.   ...|:.::|.||:.|.::
Yeast   218 VINSLWLTGGQLVAYGCGAGLNYVNNGWRILVGLSLIPTAVQFT---CLCFLPDTPRYYVMKGDL 279

  Fly   206 ASLEKSLRWYRGIRDIDD---REKPEYLSELNE------FHAELRSRDKNVGSTPMSHGYIIRLT 261
            |...:.|:  |...|..:   ..|.|.|..||:      ...::.:..|.:.:.|.:    :|..
Yeast   280 ARATEVLK--RSYTDTSEEIIERKVEELVTLNQSIPGKNVPEKVWNTIKELHTVPSN----LRAL 338

  Fly   262 FVSFLLTVCAKLSGVFVELNYAADFLGRTGYSTE---------TNY----VVLASAQCAGALLAR 313
            .:...|....:.:|....:.::.......|:...         ||:    |...|....|.....
Yeast   339 IIGCGLQAIQQFTGWNSLMYFSGTIFETVGFKNSSAVSIIVSGTNFIFTLVAFFSIDKIGRRTIL 403

  Fly   314 LVG-PRLPRKLLLC------LSSLF-AAAAVIALALFKAYGHLWLLGNWADRYLPIILLAIQLAL 370
            |:| |.:...|::|      |...| .|.||:..:.|.::|              |:::...:..
Yeast   404 LIGLPGMTMALVVCSIAFHFLGIKFDGAVAVVVSSGFSSWG--------------IVIIVFIIVF 454

  Fly   371 VSFGLYPLAAV--VSSEVLPTKLHDLLYSLASAVSWLLLFGMIEAFNAVKATIAP-GLLLYLWVF 432
            .:|....:..|  ..||:.|..:..:..|.|:|.:|.....:...|..:...|.| |...:   |
Yeast   455 AAFYALGIGTVPWQQSELFPQNVRGIGTSYATATNWAGSLVIASTFLTMLQNITPAGTFAF---F 516

  Fly   433 AGASIFVGLISLPLLPETRNRRPSAVQRELGYVDDGGVAKGS 474
            ||.|....:......||........||..|   .||...|.|
Yeast   517 AGLSCLSTIFCYFCYPELSGLELEEVQTIL---KDGFNIKAS 555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8837NP_001285582.1 MFS 54..>192 CDD:119392 37/149 (25%)
Sugar_tr 58..453 CDD:278511 94/439 (21%)
ITR1NP_010785.1 MFS_HMIT_like 92..533 CDD:340918 99/470 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157342332
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

Return to query results.
Submit another query.