DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8837 and MSS1

DIOPT Version :9

Sequence 1:NP_001285582.1 Gene:CG8837 / 33545 FlyBaseID:FBgn0031520 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_198006.1 Gene:MSS1 / 832703 AraportID:AT5G26340 Length:526 Species:Arabidopsis thaliana


Alignment Length:443 Identity:96/443 - (21%)
Similarity:180/443 - (40%) Gaps:87/443 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 DPAGTAWLTGYLFLSAALGALVSGFLALKIGPKSVLLCSGLLQISGWACIHFGYDIVHIYASRLF 118
            |..|....|..|:|:.......:.:....:|.:..:|.:|:..|.|.|......|:..:.|.|:.
plant    79 DNQGLQLFTSSLYLAGLTATFFASYTTRTLGRRLTMLIAGVFFIIGVALNAGAQDLAMLIAGRIL 143

  Fly   119 AGVASGAAFVVLPIFINEIAESREKAARLTFTIELWRTLGILIGFVLGFYVPYAFVNIVGCAV-- 181
            .|...|.|...:|:|::|||.:|.:.. |....:|..|:|||            |.|:|....  
plant   144 LGCGVGFANQAVPLFLSEIAPTRIRGG-LNILFQLNVTIGIL------------FANLVNYGTAK 195

  Fly   182 -----------------SFVFTMTFPFVQESPHYYLRKNNMASLEKSLRWYRGIRDIDDREKPEY 229
                             :.:.|:....|.|:|:..:.:..:...:..||..||    .|..:||:
plant   196 IKGGWGWRLSLGLAGIPALLLTVGALLVTETPNSLVERGRLDEGKAVLRRIRG----TDNVEPEF 256

  Fly   230 --LSELNEFHAELRSRDKNV---GSTPMSHGYIIRLTFVSFLLTVCAKLSGVFVELNYAADFLGR 289
              |.|.:....|::...:|:   .:.|.        ..::..|.:..:.:|:...:.||......
plant   257 ADLLEASRLAKEVKHPFRNLLQRRNRPQ--------LVIAVALQIFQQCTGINAIMFYAPVLFST 313

  Fly   290 TGYSTETNYVVLASAQCAGA--LLARLVG----PRLPRKLLLCLS--SLFAAAAVIALALFKAYG 346
            .|:.::.:   |.||...||  :|:.||.    .::.|::||..:  .:|.:..|||:       
plant   314 LGFGSDAS---LYSAVVTGAVNVLSTLVSIYSVDKVGRRVLLLEAGVQMFFSQVVIAI------- 368

  Fly   347 HLWLLG--------NWADRY--LPIILLAIQLALVSFGLYPLAAVVSSEVLPTKLHDLLYSLASA 401
               :||        |.:..:  |.::::...:|..::...||..::.||..|.:......|:...
plant   369 ---ILGVKVTDTSTNLSKGFAILVVVMICTYVAAFAWSWGPLGWLIPSETFPLETRSAGQSVTVC 430

  Fly   402 VSWLLLFGMIEAFNAVKATIAPGLLLYL--WVFAGASIFVGLISLPLLPETRN 452
            |:.|..|.:.:||.::......|:.::.  ||.. .|:||    :.|||||:|
plant   431 VNLLFTFIIAQAFLSMLCHFKFGIFIFFSAWVLI-MSVFV----MFLLPETKN 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8837NP_001285582.1 MFS 54..>192 CDD:119392 33/156 (21%)
Sugar_tr 58..453 CDD:278511 94/439 (21%)
MSS1NP_198006.1 MFS_STP 29..475 CDD:340919 92/438 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23500
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

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