DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fign and YTA6

DIOPT Version :10

Sequence 1:NP_608763.2 Gene:Fign / 33544 FlyBaseID:FBgn0031519 Length:523 Species:Drosophila melanogaster
Sequence 2:NP_015251.1 Gene:YTA6 / 856031 SGDID:S000005995 Length:754 Species:Saccharomyces cerevisiae


Alignment Length:440 Identity:164/440 - (37%)
Similarity:255/440 - (57%) Gaps:36/440 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 SSDLQ---APALEVSSTYPVQQAVKSRPEGQFPE-SRNNSTKKIDAQQYSSESSSQSGFGFRTAR 159
            |::||   .|...:...|..::...:||..:.|. :|.||....:....|...:|:|.....:.|
Yeast   329 SNELQIRYKPTPPLKKRYDYKKPTVNRPIIKSPTLNRQNSKSSRNIPTNSKLKASKSNTNKVSRR 393

  Fly   160 EQLIMDELKKKNRQATSEV----DAVPTGMMNFRKKTLGGKRTVSSNFVSPVAQNDNSTSSRSSS 220
            .:        :|.:.:|.|    .|||......|.|:....:..|::         :|..||...
Yeast   394 NE--------QNLEPSSPVLVSATAVPAESKPMRSKSGTPDKESSAS---------SSLDSRKED 441

  Fly   221 IPPALAHLDSKMVDHILGESMHDFKPVAWEDIAGLESAKSTFLEAIIMPLRRPDLFTGVRCPPRG 285
            |..::..:|....:.||.|.:...:.|.|||||||.:||::..||::.|..|||||.|:|.|.||
Yeast   442 ILKSVQGVDRNACEQILNEILVTDEKVYWEDIAGLRNAKNSLKEAVVYPFLRPDLFKGLREPVRG 506

  Fly   286 VLLFGPPGTGKTLIAKSIASQAKAKFFSINPSSLTSKWVGDAEKLVKTLFAVAAAHQPAIIFIDE 350
            :|||||||||||:|||::|:::.:.|||::.|||.||::|::||||:.||.:|....|:||||||
Yeast   507 MLLFGPPGTGKTMIAKAVATESNSTFFSVSASSLLSKYLGESEKLVRALFYMAKKLSPSIIFIDE 571

  Fly   351 VDSLLSKRSANENESTLRLKNEFLIH---LDGAASNEE-------IRVLVIGATNRPQELDEAVR 405
            :||:|:.||.|||||:.|:|.|.||.   |..|.:..|       .||||:||||.|..:|:|.|
Yeast   572 IDSMLTARSDNENESSRRIKTELLIQWSSLSSATAQSEDRNNTLDSRVLVLGATNLPWAIDDAAR 636

  Fly   406 RRFVRRLYVPLPTREARQKIIEKLIHQVKHNLDVRQVIELAELTDGYSGADVDTLCRYASMAPLR 470
            |||.|:||:|||..|.|...:::|:.:.|::|.......:.|:|:|:||:|:.:|.:.|:|.|:|
Yeast   637 RRFSRKLYIPLPDYETRLYHLKRLMAKQKNSLQDLDYELITEMTEGFSGSDLTSLAKEAAMEPIR 701

  Fly   471 SLTPDQMEVIETHQLPAVTMDDFKQALRVISKSVSSEDCKQFEAWNEIYG 520
            .| .|::...:..::..:.:.||:.||..|.||||||..:::|.|:..:|
Yeast   702 DL-GDKLMFADFDKIRGIEIKDFQNALLTIKKSVSSESLQKYEEWSSKFG 750

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FignNP_608763.2 PH-like <4..50 CDD:473070
P-loop containing Nucleoside Triphosphate Hydrolases 229..414 CDD:476819 100/194 (52%)
AAA_lid_3 444..495 CDD:465537 15/50 (30%)
Vps4_C <480..520 CDD:462762 13/39 (33%)
YTA6NP_015251.1 PTZ00108 <158..412 CDD:240271 19/90 (21%)
RecA-like_VPS4-like 473..645 CDD:410917 92/171 (54%)
AAA_lid_3 670..714 CDD:465537 13/44 (30%)
Vps4_C <718..750 CDD:462762 13/31 (42%)
Blue background indicates that the domain is not in the aligned region.

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