DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fign and PEX1

DIOPT Version :10

Sequence 1:NP_608763.2 Gene:Fign / 33544 FlyBaseID:FBgn0031519 Length:523 Species:Drosophila melanogaster
Sequence 2:NP_012724.1 Gene:PEX1 / 853636 SGDID:S000001680 Length:1043 Species:Saccharomyces cerevisiae


Alignment Length:353 Identity:97/353 - (27%)
Similarity:161/353 - (45%) Gaps:80/353 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   229 DSKMVDHILGESMHDFKP-------------VAWEDIAGLESAKSTFLEAIIMPLRRPDLFTGVR 280
            |:.:...:..:|:..|.|             :.|.||..|.:||...||.:..|.:...:|  |.
Yeast   663 DNVVTRELFSKSLSAFTPSALRGVKLTKETNIKWGDIGALANAKDVLLETLEWPTKYEPIF--VN 725

  Fly   281 CPPR---GVLLFGPPGTGKTLIAKSIASQAKAKFFSINPSSLTSKWVGDAEKLVKTLFAVAAAHQ 342
            ||.|   |:||:|.||.||||:|.::|.|....|.|:....:.:|::|.:|:.::.||..|.:.:
Yeast   726 CPLRLRSGILLYGYPGCGKTLLASAVAQQCGLNFISVKGPEILNKFIGASEQNIRELFERAQSVK 790

  Fly   343 PAIIFIDEVDSLLSKRSANENESTLRLKNEFLIHLDGAASNEEIRVLVIGATNRPQELDEAVRR- 406
            |.|:|.||.||:..||..:....|.|:.|:.|..:|||...:  .|.::.||:||..:|.|:.| 
Yeast   791 PCILFFDEFDSIAPKRGHDSTGVTDRVVNQLLTQMDGAEGLD--GVYILAATSRPDLIDSALLRP 853

  Fly   407 -RFVRRLYVPLPTREARQKIIEKLIHQ-----------VKHNLDVRQVIELAELTDGYSGADVDT 459
             |..:.:...:||...|..|::.:::.           ::.|.|::.:   ||.|.|:||||:..
Yeast   854 GRLDKSVICNIPTESERLDILQAIVNSKDKDTGQKKFALEKNADLKLI---AEKTAGFSGADLQG 915

  Fly   460 LC---------RYASMAPLRSLTP--DQME-------------------------VIET------ 482
            ||         |:.|.|....:.|  |.:|                         |.||      
Yeast   916 LCYNAYLKSVHRWLSAADQSEVVPGNDNIEYFSINEHGRREENRLRLKTLLQQDVVHETKTSTSA 980

  Fly   483 -HQLPA-VTMDDFKQALRVISKSVSSED 508
             .:|.| ||::|..:|.:....|:|:.:
Yeast   981 ASELTAVVTINDLLEACQETKPSISTSE 1008

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FignNP_608763.2 PH-like <4..50 CDD:473070
P-loop containing Nucleoside Triphosphate Hydrolases 229..414 CDD:476819 64/202 (32%)
AAA_lid_3 444..495 CDD:465537 24/94 (26%)
Vps4_C <480..520 CDD:462762 10/37 (27%)
PEX1NP_012724.1 PEX-1N 108..183 CDD:462729
CDC48 <401..1023 CDD:273521 97/353 (27%)
RecA-like_PEX1_r2 705..862 CDD:410934 56/160 (35%)
Blue background indicates that the domain is not in the aligned region.

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