DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fign and PEX1

DIOPT Version :9

Sequence 1:NP_001259995.1 Gene:Fign / 33544 FlyBaseID:FBgn0031519 Length:523 Species:Drosophila melanogaster
Sequence 2:NP_012724.1 Gene:PEX1 / 853636 SGDID:S000001680 Length:1043 Species:Saccharomyces cerevisiae


Alignment Length:353 Identity:97/353 - (27%)
Similarity:161/353 - (45%) Gaps:80/353 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   229 DSKMVDHILGESMHDFKP-------------VAWEDIAGLESAKSTFLEAIIMPLRRPDLFTGVR 280
            |:.:...:..:|:..|.|             :.|.||..|.:||...||.:..|.:...:|  |.
Yeast   663 DNVVTRELFSKSLSAFTPSALRGVKLTKETNIKWGDIGALANAKDVLLETLEWPTKYEPIF--VN 725

  Fly   281 CPPR---GVLLFGPPGTGKTLIAKSIASQAKAKFFSINPSSLTSKWVGDAEKLVKTLFAVAAAHQ 342
            ||.|   |:||:|.||.||||:|.::|.|....|.|:....:.:|::|.:|:.::.||..|.:.:
Yeast   726 CPLRLRSGILLYGYPGCGKTLLASAVAQQCGLNFISVKGPEILNKFIGASEQNIRELFERAQSVK 790

  Fly   343 PAIIFIDEVDSLLSKRSANENESTLRLKNEFLIHLDGAASNEEIRVLVIGATNRPQELDEAVRR- 406
            |.|:|.||.||:..||..:....|.|:.|:.|..:|||...:  .|.::.||:||..:|.|:.| 
Yeast   791 PCILFFDEFDSIAPKRGHDSTGVTDRVVNQLLTQMDGAEGLD--GVYILAATSRPDLIDSALLRP 853

  Fly   407 -RFVRRLYVPLPTREARQKIIEKLIHQ-----------VKHNLDVRQVIELAELTDGYSGADVDT 459
             |..:.:...:||...|..|::.:::.           ::.|.|::.:   ||.|.|:||||:..
Yeast   854 GRLDKSVICNIPTESERLDILQAIVNSKDKDTGQKKFALEKNADLKLI---AEKTAGFSGADLQG 915

  Fly   460 LC---------RYASMAPLRSLTP--DQME-------------------------VIET------ 482
            ||         |:.|.|....:.|  |.:|                         |.||      
Yeast   916 LCYNAYLKSVHRWLSAADQSEVVPGNDNIEYFSINEHGRREENRLRLKTLLQQDVVHETKTSTSA 980

  Fly   483 -HQLPA-VTMDDFKQALRVISKSVSSED 508
             .:|.| ||::|..:|.:....|:|:.:
Yeast   981 ASELTAVVTINDLLEACQETKPSISTSE 1008

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FignNP_001259995.1 AAA 282..418 CDD:214640 48/140 (34%)
AAA 286..416 CDD:278434 45/131 (34%)
Vps4_C <480..520 CDD:286426 10/37 (27%)
PEX1NP_012724.1 PEX-1N 108..183 CDD:401267
SpoVK 457..929 CDD:223540 81/272 (30%)
RecA-like_PEX1_r2 705..862 CDD:410934 56/160 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0464
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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