DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fign and RIX7

DIOPT Version :9

Sequence 1:NP_001259995.1 Gene:Fign / 33544 FlyBaseID:FBgn0031519 Length:523 Species:Drosophila melanogaster
Sequence 2:NP_013066.1 Gene:RIX7 / 850625 SGDID:S000003957 Length:837 Species:Saccharomyces cerevisiae


Alignment Length:684 Identity:166/684 - (24%)
Similarity:282/684 - (41%) Gaps:191/684 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 TRSSSESIHFAALKDHHARLQACESMEKAMKE-RC---QKKITMSRRTKRG-----------ITH 68
            |.|.|.|:..:..:....:.:..:..:|..|| .|   ::||...|.....           :..
Yeast   152 TWSKSGSVSESITETDDPKTEEVKKSKKRSKEGTCKVKRQKIKEDRSPPNSSLKSLGGMDDVVAQ 216

  Fly    69 AGYLFEMP--HNSVF-----EPECRGFY----ESCQQTEMASS---DLQAPALEVSSTYPVQQAV 119
            ...|..:|  |..:|     ||. ||..    ..|.:|.:|::   :||.|.:.:|:     .:|
Yeast   217 LMELIGLPILHPEIFLSTGVEPP-RGVLLHGPPGCGKTSIANALAGELQVPFISISA-----PSV 275

  Fly   120 KSRPEGQ--------FPESRNNST-----KKIDAQQYSSESSSQSGFGFRTAREQLI-MDEL--K 168
            .|...|:        |.|:|:.:.     .:|||.....:..:|.....|...:.|. ||||  :
Yeast   276 VSGMSGESEKKIRDLFDEARSLAPCLVFFDEIDAITPKRDGGAQREMERRIVAQLLTSMDELTME 340

  Fly   169 KKNRQ------ATSEVDA------------------VPT------------------GMMNFRK- 190
            |.|.:      ||:..|:                  ||.                  |.::|.| 
Yeast   341 KTNGKPVIIIGATNRPDSLDAALRRAGRFDREICLNVPNEVSRLHILKKMSDNLKIDGAIDFAKL 405

  Fly   191 ---------------KTLGGKRTVSSNF----------------------VSPVAQNDNST-SSR 217
                           .|..|...:...|                      :...|..|.|: .:.
Yeast   406 AKLTPGFVGADLKALVTAAGTCAIKRIFQTYANIKSTPTTATDSSEDNMEIDETANGDESSLKNT 470

  Fly   218 SSSIPPALAHLDSKMV----DHILGESM-------HDF-------KP------------VAWEDI 252
            ::.|.|....:..:.:    :.:.||.:       .||       :|            |.|.::
Yeast   471 ANMIDPLPLSVVQQFIRNYPEPLSGEQLSLLSIKYEDFLKALPTIQPTAKREGFATVPDVTWANV 535

  Fly   253 AGLESAKSTFLEAIIMPLRRPDLF--TGVRCPPRGVLLFGPPGTGKTLIAKSIASQAKAKFFSIN 315
            ..|:..:.....||:.|::||:|:  .|:.. |.||||:||||.||||:||::|::::|.|.||.
Yeast   536 GALQRVRLELNMAIVQPIKRPELYEKVGISA-PGGVLLWGPPGCGKTLLAKAVANESRANFISIK 599

  Fly   316 PSSLTSKWVGDAEKLVKTLFAVAAAHQPAIIFIDEVDSLLSKRSANENESTLRLKNEFLIHLDGA 380
            ...|.:|:||::|:.::.:|..|.|..|.:||.||:|:|:.:|..:.:||:.|:.|..|..|||.
Yeast   600 GPELLNKYVGESERSIRQVFTRARASVPCVIFFDELDALVPRRDTSLSESSSRVVNTLLTELDGL 664

  Fly   381 ASNEEIRVLVIGATNRPQELDEAVRR--RFVRRLYVPLPTREARQKIIEKLIHQ----VKHNLDV 439
              |:...:.||||||||..:|.|:.|  |..:.|::.||..|.:..||:.|...    :..::|.
Yeast   665 --NDRRGIFVIGATNRPDMIDPAMLRPGRLDKSLFIELPNTEEKLDIIKTLTKSHGTPLSSDVDF 727

  Fly   440 RQVIELAELTDGYSGADVDTLCRYASMAPLRS--LTPDQMEVIETHQLP---------------A 487
            .::|. .|..:.:||||:..|.|.:|:..|:.  ...::::.:..:.|.               .
Yeast   728 EEIIR-NEKCNNFSGADLAALVRESSVLALKRKFFQSEEIQSVLDNDLDKEFEDLSVGVSGEEII 791

  Fly   488 VTMDDFKQALRVISKSVSSEDCKQFEAWNEIYGV 521
            |||.||:.|||.|..|||.:|..:::..|:..|:
Yeast   792 VTMSDFRSALRKIKPSVSDKDRLKYDRLNKKMGL 825

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FignNP_001259995.1 AAA 282..418 CDD:214640 59/137 (43%)
AAA 286..416 CDD:278434 56/131 (43%)
Vps4_C <480..520 CDD:286426 15/54 (28%)
RIX7NP_013066.1 CDC48 <192..824 CDD:273521 157/641 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0464
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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