DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fign and AT1G62130

DIOPT Version :10

Sequence 1:NP_608763.2 Gene:Fign / 33544 FlyBaseID:FBgn0031519 Length:523 Species:Drosophila melanogaster
Sequence 2:NP_176404.3 Gene:AT1G62130 / 842509 AraportID:AT1G62130 Length:1043 Species:Arabidopsis thaliana


Alignment Length:567 Identity:156/567 - (27%)
Similarity:244/567 - (43%) Gaps:167/567 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SSWRSK-------LLLICQQTRSSS-ESIHFAALKDHHAR-----LQACESMEKAMK---ERCQK 54
            |:::||       |::||.||.|.: :......|.|....     :...|.:.|:.|   :|..:
plant   578 SAFKSKLEVISDNLIVICSQTHSDNPKEKGIGRLTDLFVNKVTIYMPQGEELLKSWKYHLDRDAE 642

  Fly    55 KITMSRRTKRGITH-------AGYLFEMPHNSVFEPECRGFYESCQQTEMASSDLQAPALEVSST 112
            .:.|    |....|       .|.            ||.|....|    |....|:..:.|....
plant   643 TLKM----KANYNHLRMVLGRCGI------------ECEGIETLC----MKDLTLRRDSAEKIIG 687

  Fly   113 YPVQQAVKSRPEGQFPESRNNSTKKIDAQQYSSESSSQSGFGFRTAREQLIMDELKKKNRQATSE 177
            :.:...:||.| |..|          |.:...|..|.:.|.       :|:..|.||..:...:|
plant   688 WALSHHIKSNP-GADP----------DVRVILSLESLKCGI-------ELLEIESKKSLKDIVTE 734

  Fly   178 VDAVPTGMMNFRKKTLGGKRTVSSNFVSPVAQNDNSTSSRSSSIPPALAHLDSKMVDHILGESMH 242
                                               :|...|..|||:           .:|    
plant   735 -----------------------------------NTFEISDIIPPS-----------EIG---- 749

  Fly   243 DFKPVAWEDIAGLESAKSTFLEAIIMPLRRPDLFTGVRC------PPRGVLLFGPPGTGKTLIAK 301
                |.::||..||:.|.|..|.:::|.:.|:||    |      |..|:|||||.|||||::||
plant   750 ----VTFDDIGALENVKDTLKELVMLPFQWPELF----CKGQLTKPCNGILLFGPSGTGKTMLAK 806

  Fly   302 SIASQAKAKFFSINPSSLTSKWVGDAEKLVKTLFAVAAAHQPAIIFIDEVDSLLSKRSANENEST 366
            ::|::|.|...:::    .|:|..:.||.||.:|::|:...|:|||:|||:|:|       :...
plant   807 AVATEAGANLINMS----MSRWFSEGEKYVKAVFSLASKISPSIIFLDEVESML-------HRYR 860

  Fly   367 LRLKNEFLIHLDGAASNEEIRVLVIGATNRPQELDEAVRRRFVRRLYVPLPTREARQKIIEKLIH 431
            |:.||||:|:.||..:||:.||||:.|||||.:|||||.||...||.|.||...:|.||::.::.
plant   861 LKTKNEFIINWDGLRTNEKERVLVLAATNRPFDLDEAVIRRLPHRLMVGLPDARSRSKILKVILS 925

  Fly   432 QVKHNLDVRQVIELAELTDGYSGADVDTLCRYASMAPLRSLTPDQMEVIETHQ------------ 484
            :...:.|. .:.|:|.:|:||||.|:..||..|:...:       :|::|..:            
plant   926 KEDLSPDF-DIDEVASMTNGYSGNDLKNLCVTAARRRI-------IEIVEKEKSERDAAVAEGRV 982

  Fly   485 ---------LPAVTMDDFKQALRVISKSVSSEDCKQ--FEAWNEIYG 520
                     |..:.|:||:.||.::|.|:||:....  ...|||.||
plant   983 PPAGSGGSDLRVLKMEDFRNALELVSMSISSKSVNMTALRQWNEDYG 1029

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FignNP_608763.2 PH-like <4..50 CDD:473070 14/59 (24%)
P-loop containing Nucleoside Triphosphate Hydrolases 229..414 CDD:476819 76/190 (40%)
AAA_lid_3 444..495 CDD:465537 17/71 (24%)
Vps4_C <480..520 CDD:462762 14/62 (23%)
AT1G62130NP_176404.3 FHA 93..193 CDD:469597
RPT1 705..1016 CDD:440835 119/394 (30%)
P-loop containing Nucleoside Triphosphate Hydrolases 754..908 CDD:476819 74/168 (44%)
Blue background indicates that the domain is not in the aligned region.

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