DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fign and AT1G50140

DIOPT Version :10

Sequence 1:NP_608763.2 Gene:Fign / 33544 FlyBaseID:FBgn0031519 Length:523 Species:Drosophila melanogaster
Sequence 2:NP_175433.2 Gene:AT1G50140 / 841436 AraportID:AT1G50140 Length:1003 Species:Arabidopsis thaliana


Alignment Length:371 Identity:142/371 - (38%)
Similarity:212/371 - (57%) Gaps:40/371 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   169 KKNRQATSEVDAVPTGMMNFRKKTL----GGKRTVSSNFVSP------VAQNDNSTSSRSSSIPP 223
            |.:..|:..|..|..|.::..:::|    ...|.:..|.:.|      :|:::...:..|:.:.|
plant   642 KNHYLASCPVPLVKGGRLSLPRESLEISIARLRKLEDNSLKPSQNLKNIAKDEYERNFVSAVVAP 706

  Fly   224 ALAHLDSKMVDHILGESMHDFKPVAWEDIAGLESAKSTFLEAIIMPLRRPDLFT--GVRCPPRGV 286
                          ||.     .|.:|||..||..|....|.:|:|:|||:||.  .:..|.:|:
plant   707 --------------GEI-----GVKFEDIGALEDVKKALNELVILPMRRPELFARGNLLRPCKGI 752

  Fly   287 LLFGPPGTGKTLIAKSIASQAKAKFFSINPSSLTSKWVGDAEKLVKTLFAVAAAHQPAIIFIDEV 351
            ||||||||||||:||::|::|.|.|.||..|:|||||.||||||.|.||:.|....|.|||:||:
plant   753 LLFGPPGTGKTLLAKALATEAGANFISITGSTLTSKWFGDAEKLTKALFSFATKLAPVIIFVDEI 817

  Fly   352 DSLLSKR-SANENESTLRLKNEFLIHLDGAASNEEIRVLVIGATNRPQELDEAVRRRFVRRLYVP 415
            ||||..| .::|:|:|.|::|||:...||..|.:..|:|::||||||.:||:||.||..||:||.
plant   818 DSLLGARGGSSEHEATRRMRNEFMAAWDGLRSKDSQRILILGATNRPFDLDDAVIRRLPRRIYVD 882

  Fly   416 LPTREARQKIIEKLIHQVKHNLDVR-QVIELAELTDGYSGADVDTLCRYASMAPLRSLTPDQMEV 479
            ||..|.|.||::  |.....||:.. |..:||:.|:||||:|:..||..|:..|::.|..::.:.
plant   883 LPDAENRLKILK--IFLTPENLESDFQFEKLAKETEGYSGSDLKNLCIAAAYRPVQELLQEEQKG 945

  Fly   480 IETHQLP---AVTMDDFKQALRVISKSVS--SEDCKQFEAWNEIYG 520
            ......|   ::::|||.|:...:|.||:  :....:...|||.||
plant   946 ARAEASPGLRSLSLDDFIQSKAKVSPSVAYDATTMNELRKWNEQYG 991

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FignNP_608763.2 PH-like <4..50 CDD:473070
P-loop containing Nucleoside Triphosphate Hydrolases 229..414 CDD:476819 92/187 (49%)
AAA_lid_3 444..495 CDD:465537 17/53 (32%)
Vps4_C <480..520 CDD:462762 11/44 (25%)
AT1G50140NP_175433.2 McrB 546..>770 CDD:441011 45/146 (31%)
P-loop containing Nucleoside Triphosphate Hydrolases 715..881 CDD:476819 88/165 (53%)
AAA_lid_3 905..941 CDD:465537 14/35 (40%)
Blue background indicates that the domain is not in the aligned region.

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