DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fign and AT1G02890

DIOPT Version :10

Sequence 1:NP_608763.2 Gene:Fign / 33544 FlyBaseID:FBgn0031519 Length:523 Species:Drosophila melanogaster
Sequence 2:NP_171788.3 Gene:AT1G02890 / 839507 AraportID:AT1G02890 Length:1246 Species:Arabidopsis thaliana


Alignment Length:333 Identity:127/333 - (38%)
Similarity:205/333 - (61%) Gaps:27/333 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   209 QNDNSTSSRSSSIPPALAHLDSKMVDHILGESMHDFKPVAWEDIAGLESAKSTFLEAIIMPLRRP 273
            ||:|.::.:|..........:.|::..::..|  |. .|::.||..||:.|.|..|.:::||:||
plant   906 QNENKSTKKSLKDVVTENEFEKKLLSDVIPPS--DI-GVSFSDIGALENVKDTLKELVMLPLQRP 967

  Fly   274 DLF--TGVRCPPRGVLLFGPPGTGKTLIAKSIASQAKAKFFSINPSSLTSKWVGDAEKLVKTLFA 336
            :||  ..:..|.:|:|||||||||||::||::|::|.|.|.:|:.||:||||.|:.||.||.:|:
plant   968 ELFGKGQLTKPTKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFS 1032

  Fly   337 VAAAHQPAIIFIDEVDSLLSKR-SANENESTLRLKNEFLIHLDGAASNEEIRVLVIGATNRPQEL 400
            :|:...|::||:|||||:|.:| :..|:|:..::||||:|:.||..:.::.||||:.|||||.:|
plant  1033 LASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMINWDGLRTKDKERVLVLAATNRPFDL 1097

  Fly   401 DEAVRRRFVRRLYVPLPTREARQKIIEKLI--HQVKHNLDVRQVIELAELTDGYSGADVDTLCRY 463
            ||||.||..|||.|.||....|.||:..::  .::..::|:..:   |.:||||||:|:..||..
plant  1098 DEAVIRRLPRRLMVNLPDSANRSKILSVILAKEEMAEDVDLEAI---ANMTDGYSGSDLKNLCVT 1159

  Fly   464 ASMAPLRSLTPDQ-----MEVIETHQLP---------AVTMDDFKQALRVISKSVSSE--DCKQF 512
            |:..|:|.:...:     :...|...:|         .:.|:|||.|...:..||:|:  :..:.
plant  1160 AAHLPIREILEKEKKERSVAQAENRAMPQLYSSTDVRPLNMNDFKTAHDQVCASVASDSSNMNEL 1224

  Fly   513 EAWNEIYG 520
            :.|||:||
plant  1225 QQWNELYG 1232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FignNP_608763.2 PH-like <4..50 CDD:473070
P-loop containing Nucleoside Triphosphate Hydrolases 229..414 CDD:476819 88/187 (47%)
AAA_lid_3 444..495 CDD:465537 18/64 (28%)
Vps4_C <480..520 CDD:462762 13/50 (26%)
AT1G02890NP_171788.3 FHA 124..223 CDD:469597
RecA-like_ATAD1 945..1111 CDD:410928 84/165 (51%)
AAA_lid_3 1135..1175 CDD:465537 14/42 (33%)
Blue background indicates that the domain is not in the aligned region.

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