DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fign and AT5G53540

DIOPT Version :10

Sequence 1:NP_608763.2 Gene:Fign / 33544 FlyBaseID:FBgn0031519 Length:523 Species:Drosophila melanogaster
Sequence 2:NP_200166.1 Gene:AT5G53540 / 835436 AraportID:AT5G53540 Length:403 Species:Arabidopsis thaliana


Alignment Length:354 Identity:119/354 - (33%)
Similarity:195/354 - (55%) Gaps:34/354 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   172 RQATSEVDAVPTGMMNFRKKTLGGKRTVSSNFVSPVAQNDNSTSSRSSSIPPALAHLDSKMVDHI 236
            ||.....||.        ||:|..||.::.....|:.|.:......:..:...| |:|       
plant    35 RQLDPNRDAA--------KKSLEHKREIAKRLGRPLIQTNQYEDVIACDVINPL-HID------- 83

  Fly   237 LGESMHDFKPVAWEDIAGLESAKSTFLEAIIMPLRRPDLFTGVRC--PPRGVLLFGPPGTGKTLI 299
                      |.:..|.||||.|....|.:|:||:||:||...:.  |.:||||:||||||||::
plant    84 ----------VEFGSIGGLESIKQALYELVILPLKRPELFAYGKLLGPQKGVLLYGPPGTGKTML 138

  Fly   300 AKSIASQAKAKFFSINPSSLTSKWVGDAEKLVKTLFAVAAAHQPAIIFIDEVDSLLSKRSANENE 364
            ||:||.:::|.|.::..|:|.|||.|||:|||..:|::|...||||||||||||.|.:|.:.:||
plant   139 AKAIARESEAVFINVKVSNLMSKWFGDAQKLVSAVFSLAYKLQPAIIFIDEVDSFLGQRRSTDNE 203

  Fly   365 STLRLKNEFLIHLDGAASNEEIRVLVIGATNRPQELDEAVRRRFVRRLYVPLPTREARQKIIEKL 429
            :...:|.||:...||..:::..||:|:.|||||.|||||:.|||.:...:.:|..:.|.:|::.:
plant   204 AMSNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILRRFPQSFEIGMPDCQERAQILKVV 268

  Fly   430 I--HQVKHNLDVRQVIELAELTDGYSGADVDTLCRYASMAPLRSLTPDQMEVIETHQLPAVTMDD 492
            :  ..|:.:::..::   |.|.:.|:|:|:..||:.|:..|:|.:...:.|.........:|..|
plant   269 LKGESVESDINYDRI---ARLCEDYTGSDIFELCKKAAYFPIREILEAEKEGKRVSVPRPLTQLD 330

  Fly   493 FKQALRVISKS-VSSEDCKQFEAWNEIYG 520
            .::.|....|: |::.:.....:.:.::|
plant   331 LEKVLATSKKTQVAASEYTGLSSQSSVWG 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FignNP_608763.2 PH-like <4..50 CDD:473070
P-loop containing Nucleoside Triphosphate Hydrolases 229..414 CDD:476819 85/186 (46%)
AAA_lid_3 444..495 CDD:465537 13/50 (26%)
Vps4_C <480..520 CDD:462762 5/40 (13%)
AT5G53540NP_200166.1 RecA-like_ATAD1 88..253 CDD:410928 83/164 (51%)
AAA_lid_3 277..313 CDD:465537 10/38 (26%)
Blue background indicates that the domain is not in the aligned region.

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