DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fign and AT4G27680

DIOPT Version :10

Sequence 1:NP_608763.2 Gene:Fign / 33544 FlyBaseID:FBgn0031519 Length:523 Species:Drosophila melanogaster
Sequence 2:NP_194498.1 Gene:AT4G27680 / 828882 AraportID:AT4G27680 Length:398 Species:Arabidopsis thaliana


Alignment Length:365 Identity:124/365 - (33%)
Similarity:191/365 - (52%) Gaps:67/365 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   171 NRQATSEVDAVPTGMMNFRKKTLGGKRTVSSNFVSPVAQ-NDNSTSSRSSSIPPALAHLDSKMVD 234
            ||:|:              ||.|..|:.:|.....|:.| |..........|.|          |
plant    37 NREAS--------------KKALEHKKEISKRLGRPLVQTNPYEDVIACDVINP----------D 77

  Fly   235 HILGESMHDFKPVAWEDIAGLESAKSTFLEAIIMPLRRPDLFTGVRC--PPRGVLLFGPPGTGKT 297
            ||         .|.:..|.|||:.|....|.:|:||:||:||...:.  |.:||||:||||||||
plant    78 HI---------DVEFGSIGGLETIKQALYELVILPLKRPELFAYGKLLGPQKGVLLYGPPGTGKT 133

  Fly   298 LIAKSIASQAKAKFFSINPSSLTSKWVGDAEKLVKTLFAVAAAHQPAIIFIDEVDSLLSKRSANE 362
            ::||:||.::.|.|.::..|:|.|||.|||:|||..:|::|...||||||||||:|.|.:|.:.:
plant   134 MLAKAIAKESGAVFINVRVSNLMSKWFGDAQKLVSAVFSLAYKLQPAIIFIDEVESFLGQRRSTD 198

  Fly   363 NESTLRLKNEFLIHLDGAASNEEIRVLVIGATNRPQELDEAVRRRFVRRLYVPLPTREARQKIIE 427
            :|:...:|.||:...||.:::...||:|:.|||||.|||||:.||..:...:.:|.|..|.:|::
plant   199 HEAMANMKTEFMALWDGFSTDPHARVMVLAATNRPSELDEAILRRLPQAFEIGIPDRRERAEILK 263

  Fly   428 KLI--HQVKHNLDVRQVIELAELTDGYSGADVDTLCRYASMAPLRSLTPDQMEVIETHQLPAVTM 490
            ..:  .:|:.::|...:   |.|.:||:|:|:..||:.|:..|:|       |:::..:.....:
plant   264 VTLKGERVEPDIDFDHI---ARLCEGYTGSDIFELCKKAAYFPIR-------EILDAERKGKPCL 318

  Fly   491 D-------DFKQALRVISK--------SVSSEDCKQFEAW 515
            |       |.::.|....|        |:||    |..||
plant   319 DPRPLSQLDLEKVLATSKKTQVAAGEYSLSS----QSSAW 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FignNP_608763.2 PH-like <4..50 CDD:473070
P-loop containing Nucleoside Triphosphate Hydrolases 229..414 CDD:476819 83/186 (45%)
AAA_lid_3 444..495 CDD:465537 14/57 (25%)
Vps4_C <480..520 CDD:462762 10/51 (20%)
AT4G27680NP_194498.1 RecA-like_ATAD1 85..250 CDD:410928 79/164 (48%)
AAA_lid_3 274..310 CDD:465537 13/45 (29%)
Blue background indicates that the domain is not in the aligned region.

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