DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fign and AT2G45500

DIOPT Version :9

Sequence 1:NP_001259995.1 Gene:Fign / 33544 FlyBaseID:FBgn0031519 Length:523 Species:Drosophila melanogaster
Sequence 2:NP_001323445.1 Gene:AT2G45500 / 819158 AraportID:AT2G45500 Length:497 Species:Arabidopsis thaliana


Alignment Length:477 Identity:170/477 - (35%)
Similarity:274/477 - (57%) Gaps:55/477 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 ESCQQTEMASSDLQAPALEVSSTYPV-QQAVKSRPEGQFPESRNNSTKKI--------------- 138
            ||.:...::||...:.::......|| .:.:..:.:|.|..::....|.:               
plant    28 ESKKDPSVSSSSTSSESMNGIDGVPVTNERIAYKLKGYFDLAKEEIAKGVRAEEWGLHDDALLHY 92

  Fly   139 -DAQQYSSESSSQSGFGFRTAREQLIMDELKKK----NRQATSEVDAVPTGMMNFRKKTLGGKRT 198
             :||:..:|::|.....:.::.|:..:...::|    ..|.:..:.|:..||..       .|||
plant    93 RNAQRIMNEATSTPSPSYISSSEKEKVRSYREKISNWQNQVSERLQALGVGMSE-------NKRT 150

  Fly   199 V---SSNFVSPVAQNDNSTSSRSSSI-----------------PPALAH----LDSKMVDHILGE 239
            |   ||..||..|.....|.|:.:.:                 |..:..    .|.|:|: ::..
plant   151 VAYPSSASVSSTASRYRKTLSQKTPVARGGVATPRNPKDAAASPKPVKESGNVYDDKLVE-MINT 214

  Fly   240 SMHDFKP-VAWEDIAGLESAKSTFLEAIIMPLRRPDLFTGVRCPPRGVLLFGPPGTGKTLIAKSI 303
            ::.|..| |.|:|:|||..||...||.:|:|.:|.|||||:|.|.||:|||||||.|||::||::
plant   215 TIVDRSPSVKWDDVAGLNGAKQALLEMVILPAKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAV 279

  Fly   304 ASQAKAKFFSINPSSLTSKWVGDAEKLVKTLFAVAAAHQPAIIFIDEVDSLLSKRSANENESTLR 368
            ||:::|.||:::.|||||||||:|||||||||.||.:.||::||:||:||::|.||.:|||::.|
plant   280 ASESQATFFNVSASSLTSKWVGEAEKLVKTLFQVAISRQPSVIFMDEIDSIMSTRSTSENEASRR 344

  Fly   369 LKNEFLIHLDGAASNEEIRVLVIGATNRPQELDEAVRRRFVRRLYVPLPTREARQKIIEKLIHQV 433
            ||:||||..||..||.:..|::|||||:|||||:||.||.|:|:|||||....|:.:.:..:...
plant   345 LKSEFLIQFDGVTSNPDDLVIIIGATNKPQELDDAVLRRLVKRIYVPLPDSNVRKLLFKTKLKCQ 409

  Fly   434 KHNLDVRQVIELAELTDGYSGADVDTLCRYASMAPLRSLTPDQMEVIETHQLPAVTMDDFKQALR 498
            .|:|....:.::.:.|:||||:|:..||..|:|.|:|.|..:.: .|:.:::.::..|||::::.
plant   410 PHSLSDGDIDKIVKETEGYSGSDLQALCEEAAMMPIRELGANIL-TIQANKVRSLRYDDFRKSMA 473

  Fly   499 VISKSVSSEDCKQFEAWNEIYG 520
            ||..|:|....::.|.||..:|
plant   474 VIRPSLSKSKWEELERWNSEFG 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FignNP_001259995.1 AAA 282..418 CDD:214640 86/135 (64%)
AAA 286..416 CDD:278434 81/129 (63%)
Vps4_C <480..520 CDD:286426 11/39 (28%)
AT2G45500NP_001323445.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0464
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1176820at2759
OrthoFinder 1 1.000 - - FOG0001088
OrthoInspector 1 1.000 - - otm3335
orthoMCL 1 0.900 - - OOG6_100722
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.720

Return to query results.
Submit another query.