DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fign and Trip13

DIOPT Version :10

Sequence 1:NP_608763.2 Gene:Fign / 33544 FlyBaseID:FBgn0031519 Length:523 Species:Drosophila melanogaster
Sequence 2:NP_081458.1 Gene:Trip13 / 69716 MGIID:1916966 Length:432 Species:Mus musculus


Alignment Length:350 Identity:90/350 - (25%)
Similarity:149/350 - (42%) Gaps:92/350 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   223 PALAHLDSKMVDHILGESMHDFKPVA-----WEDIAGLESAKSTFLEAIIMPLRRPD------LF 276
            |:..:||.: .::|:..| |...|.|     |:.:......||..|:.::..:...|      |.
Mouse   107 PSSENLDEE-TENIIAAS-HWVLPAAEFHGLWDSLVYDVEVKSHLLDYVMTTVLFSDKNVDSNLI 169

  Fly   277 TGVRCPPRGVLLFGPPGTGKTLIAKSIASQAKAKFFS---------INPSSLTSKWVGDAEKLVK 332
            |..|.    |||.||||||||.:.|::|.:...:..|         ||..||.|||..::.|||.
Mouse   170 TWNRV----VLLHGPPGTGKTSLCKALAQKLTIRLSSRYRYGQLIEINSHSLFSKWFSESGKLVT 230

  Fly   333 TLFAV---AAAHQPAIIF--IDEVDSLLSKRSA----NENESTLRLKNEFLIHLDGAASNEEIRV 388
            .:|..   ....:.|::|  ||||:||.:.|:|    .|....:|:.|..|..:|....:.  .|
Mouse   231 KMFQKIQDLIDDKEALVFVLIDEVESLTAARNACRAGAEPSDAIRVVNAVLTQIDQIKRHS--NV 293

  Fly   389 LVIGATNRPQELDEAVRRRFVRRLYVPLPTREA--------------------RQKIIE----KL 429
            :::..:|..:::|.|...|...:.|:..|:..|                    ||:::.    ::
Mouse   294 VILTTSNITEKIDVAFVDRADIKQYIGPPSAAAIFKIYLSCLEELMKCQIIYPRQQLLTLRELEM 358

  Fly   430 IHQVKHNLDVRQVI--ELAELTDGYSGADVDTLCRYASMAPLRSLTPDQMEVIETH----QLPAV 488
            |..:::|:....::  |::..::|.||            ..||.|.      ...|    |.|:|
Mouse   359 IGFIENNVSKLSLLLSEISRKSEGLSG------------RVLRKLP------FLAHALYIQAPSV 405

  Fly   489 TMDDFKQALRVISKSVSSEDCKQFE 513
            |::.|.|||   |.:|.    ||||
Mouse   406 TIEGFLQAL---SLAVD----KQFE 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FignNP_608763.2 PH-like <4..50 CDD:473070
P-loop containing Nucleoside Triphosphate Hydrolases 229..414 CDD:476819 59/213 (28%)
AAA_lid_3 444..495 CDD:465537 13/54 (24%)
Vps4_C <480..520 CDD:462762 14/37 (38%)
Trip13NP_081458.1 McrB 34..>205 CDD:441011 30/103 (29%)
RecA-like_Pch2-like 121..319 CDD:410916 57/204 (28%)
Blue background indicates that the domain is not in the aligned region.

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