DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fign and Nvl

DIOPT Version :10

Sequence 1:NP_608763.2 Gene:Fign / 33544 FlyBaseID:FBgn0031519 Length:523 Species:Drosophila melanogaster
Sequence 2:NP_080447.1 Gene:Nvl / 67459 MGIID:1914709 Length:855 Species:Mus musculus


Alignment Length:490 Identity:129/490 - (26%)
Similarity:218/490 - (44%) Gaps:96/490 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 EKAMKERCQKKITMSRRTKRGITHAGYLFEMPHNSVFEPECRGFYESCQQTEMASSDLQAPALE- 108
            ::|.:||..:  |:.|:.:...|     |...|.:...|   ||         ..:||.|...| 
Mouse   435 DEAARERILQ--TLCRKLRLPET-----FNFCHLAHLTP---GF---------VGADLMALCREA 480

  Fly   109 ----VSSTYPVQQA-VKSRPEGQFPESRNNSTKKIDAQQYSSESSSQSGFGFRTAREQLIMDELK 168
                |:.....||| .|.:||.:...|..:..:::.|     |.:|::            .|||:
Mouse   481 AMCAVNRVLMKQQAQQKKKPEIEGLPSEGDQEERLGA-----EPTSET------------QDELQ 528

  Fly   169 K-----KNRQATSEVDAVPTGMMNFRKKTLGGKRTVSSNFVSPVAQNDNSTSSRSSSIPPALAHL 228
            :     :::...||             :.:.|.....::|:..:|:...|.........|     
Mouse   529 RLLGLLRDQDPLSE-------------EQMQGLCIELNDFIVALAEVQPSAKREGFVTVP----- 575

  Fly   229 DSKMVDHILGESMHDFKPVAWEDIAGLESAKSTFLEAIIMPLRRPDLFTGVRC-PPRGVLLFGPP 292
                             .|.|.||..||..:...:.||:.|:|.||.|..:.. .|.|:||.|||
Mouse   576 -----------------NVTWADIGALEDIRDELIMAILAPVRNPDQFRTLGLGTPAGILLAGPP 623

  Fly   293 GTGKTLIAKSIASQAKAKFFSINPSSLTSKWVGDAEKLVKTLFAVAAAHQPAIIFIDEVDSLLSK 357
            |.||||:||::|:::...|.|:....|.:.:||::|:.|:.:|..|....|.:||.||||:|..:
Mouse   624 GCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPR 688

  Fly   358 RSANENESTLRLKNEFLIHLDGAASNEEIRVLVIGATNRPQELDEAVRR--RFVRRLYVPLPTRE 420
            ||..|..:::|:.|:.|..:||..:.::  |.::.|||||..:|.|:.|  |..:.|:|.||...
Mouse   689 RSDRETGASVRVVNQLLTEMDGLETRQQ--VFILAATNRPDIIDPAILRPGRLDKTLFVGLPPPA 751

  Fly   421 ARQKIIEKLI-HQVKHNLDVRQVIELAELTDG-----YSGADVDTLCRYASMAPLRSLTPDQMEV 479
            .|..|::.:. :..|..||  :.:.|..:.:.     |:|||:..|.|.||:..||.....|...
Mouse   752 DRVAILKTITKNGTKPPLD--EDVNLETIANDLRCNCYTGADLTALVREASLCALRQEITAQKNG 814

  Fly   480 IETHQLPAVTMDDFKQALRVISKSVSSEDCKQFEA 514
            :...:| .|:...|:.|.:.:..|:|.:|...:||
Mouse   815 VGAGEL-KVSHKHFEDAFKKVKPSISIKDQVMYEA 848

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FignNP_608763.2 PH-like <4..50 CDD:473070 1/4 (25%)
P-loop containing Nucleoside Triphosphate Hydrolases 229..414 CDD:476819 64/187 (34%)
AAA_lid_3 444..495 CDD:465537 15/55 (27%)
Vps4_C <480..520 CDD:462762 9/35 (26%)
NvlNP_080447.1 Interaction with RPL5. /evidence=ECO:0000250|UniProtKB:O15381 1..219
Nucleolin_bd 2..72 CDD:465247
Nucleolar localization signal. /evidence=ECO:0000269|PubMed:21474449 49..52
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 83..234
Nuclear localization signal. /evidence=ECO:0000250|UniProtKB:O15381 85..88
Nuclear localization signal. /evidence=ECO:0000250|UniProtKB:O15381 217..231
CDC48 <242..855 CDD:273521 129/490 (26%)
Interaction with WDR74. /evidence=ECO:0000250|UniProtKB:O15381 266..473 11/56 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 496..523 7/31 (23%)
Blue background indicates that the domain is not in the aligned region.

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