DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fign and Spast

DIOPT Version :10

Sequence 1:NP_608763.2 Gene:Fign / 33544 FlyBaseID:FBgn0031519 Length:523 Species:Drosophila melanogaster
Sequence 2:NP_001156342.1 Gene:Spast / 50850 MGIID:1858896 Length:614 Species:Mus musculus


Alignment Length:473 Identity:169/473 - (35%)
Similarity:262/473 - (55%) Gaps:72/473 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 YESCQQTE--------MASSDLQAPALEVSSTYPVQQAVKSRPEGQFPESRNNSTKKIDAQQYSS 145
            ||..::.:        ||...||.    :....||.|..||:.: .:.||.|.:.:       :.
Mouse   169 YERARRLQAKMMTNLVMAKDRLQL----LEKLQPVLQFSKSQTD-VYNESTNLTCR-------NG 221

  Fly   146 ESSSQSGFGFRTAREQLIMDELKKKNRQATSEVDAVPTGMMNFRKKTL---------GGKRTVSS 201
            ...|:||             .:.|:....|...:::|      |.||:         |..|..|.
Mouse   222 HLQSESG-------------AVPKRKDPLTHASNSLP------RSKTVLKSGSAGLSGHHRAPSC 267

  Fly   202 NFVS----------PVAQNDNSTSSRSSSIPPA--------------LAHLDSKMVDHILGESMH 242
            :.:|          |.|.....|...:.:..|:              ..::||.:.:.|:.|.:.
Mouse   268 SGLSMVSGARPGPGPAATTHKGTPKPNRTNKPSTPTTAVRKKKDLKNFRNVDSNLANLIMNEIVD 332

  Fly   243 DFKPVAWEDIAGLESAKSTFLEAIIMPLRRPDLFTGVRCPPRGVLLFGPPGTGKTLIAKSIASQA 307
            :...|.::||||.|.||....|.:|:|..||:||||:|.|.||:|||||||.|||::||::|:::
Mouse   333 NGTAVKFDDIAGQELAKQALQEIVILPSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAES 397

  Fly   308 KAKFFSINPSSLTSKWVGDAEKLVKTLFAVAAAHQPAIIFIDEVDSLLSKRSANENESTLRLKNE 372
            .|.||:|:.:|||||:||:.||||:.|||||...||:|||||||||||.:|...|::::.|||.|
Mouse   398 NATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCERREGEHDASRRLKTE 462

  Fly   373 FLIHLDGAASNEEIRVLVIGATNRPQELDEAVRRRFVRRLYVPLPTREARQKIIEKLIHQVKHNL 437
            |||..||..|..:.||||:|||||||||||||.|||::|:||.||..|.|..:::.|:.:....|
Mouse   463 FLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLRRFIKRVYVSLPNEETRLLLLKNLLCKQGSPL 527

  Fly   438 DVRQVIELAELTDGYSGADVDTLCRYASMAPLRSLTPDQMEVIETHQLPAVTMDDFKQALRVISK 502
            ..:::.:||.:||||||:|:..|.:.|::.|:|.|.|:|::.:...::..:.:.||.::|:.|.:
Mouse   528 TQKELAQLARMTDGYSGSDLTALAKDAALGPIRELKPEQVKNMSASEMRNIRLSDFTESLKKIKR 592

  Fly   503 SVSSEDCKQFEAWNEIYG 520
            |||.:..:.:..||:.:|
Mouse   593 SVSPQTLEAYIRWNKDFG 610

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FignNP_608763.2 PH-like <4..50 CDD:473070
P-loop containing Nucleoside Triphosphate Hydrolases 229..414 CDD:476819 104/184 (57%)
AAA_lid_3 444..495 CDD:465537 18/50 (36%)
Vps4_C <480..520 CDD:462762 9/39 (23%)
SpastNP_001156342.1 Required for interaction with RTN1. /evidence=ECO:0000250|UniProtKB:Q9UBP0 1..298 30/159 (19%)
Required for midbody localization. /evidence=ECO:0000250|UniProtKB:Q9UBP0 1..192 5/22 (23%)
Required for interaction with ATL1. /evidence=ECO:0000250|UniProtKB:Q9UBP0 1..78
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..48
Required for nuclear localization. /evidence=ECO:0000250|UniProtKB:Q9UBP0 1..48
Nuclear localization signal. /evidence=ECO:0000255|HAMAP-Rule:MF_03021 4..11
Required for interaction with SSNA1 and microtubules. /evidence=ECO:0000250|UniProtKB:Q9UBP0 48..85
Nuclear export signal. /evidence=ECO:0000255|HAMAP-Rule:MF_03021 57..65
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 91..112
Sufficient for interaction with CHMP1B. /evidence=ECO:0000250|UniProtKB:Q9UBP0 110..194 6/28 (21%)
Required for interaction with microtubules. /evidence=ECO:0000250|UniProtKB:Q9UBP0 112..198 6/32 (19%)
MIT_spastin 114..193 CDD:239142 6/27 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 220..306 17/104 (16%)
Sufficient for microtubule severing. /evidence=ECO:0000250|UniProtKB:Q9UBP0 226..614 154/404 (38%)
Required for interaction with microtubules and microtubule severing. /evidence=ECO:0000250|UniProtKB:Q9UBP0 268..326 7/57 (12%)
Nuclear localization signal. /evidence=ECO:0000255|HAMAP-Rule:MF_03021 307..310 0/2 (0%)
Required for interaction with microtubules. /evidence=ECO:0000250|UniProtKB:Q9UBP0 308..310 0/1 (0%)
RecA-like_spastin 341..504 CDD:410932 99/162 (61%)
AAA_lid_3 531..585 CDD:465537 18/53 (34%)
Vps4_C <578..610 CDD:462762 9/31 (29%)
Blue background indicates that the domain is not in the aligned region.

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