DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fign and Pex1

DIOPT Version :9

Sequence 1:NP_001259995.1 Gene:Fign / 33544 FlyBaseID:FBgn0031519 Length:523 Species:Drosophila melanogaster
Sequence 2:NP_001102690.1 Gene:Pex1 / 500006 RGDID:1559939 Length:1283 Species:Rattus norvegicus


Alignment Length:547 Identity:128/547 - (23%)
Similarity:225/547 - (41%) Gaps:141/547 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 RSKLLLICQQTRSSSESIHFAALKDHHARLQA------CESMEKAMKERCQKKITMSRRTKRGIT 67
            |:..|||.....|...::..|..|:.|..|.|      |:::.....|..||.:.::        
  Rat   591 RNGALLITGGKGSGKSTLAKAICKEAHDALDAHVEMVDCKALRGKRLESIQKALEVA-------- 647

  Fly    68 HAGYLFEMPHNSVFEPECRGFYESC--QQTEMASSDL-------QAPALEVSSTYPVQQAVKSRP 123
                                |.|:.  |.:.:...||       ..|..|.|     .:||:|: 
  Rat   648 --------------------FSEAAWRQPSVILLDDLDLIAGLPSTPEHEHS-----PEAVQSQ- 686

  Fly   124 EGQFPESRNNSTKKIDAQ------------QYSSESSSQSGFGFRTAREQLIMDELKKKNRQATS 176
              :...:.||..|:..:.            |:|...|..|..|..|.:   .:..::..:::...
  Rat   687 --RLAHALNNMIKEFVSMGSLVALIATSQLQHSLHPSLVSAQGVHTFQ---CIQHIQPPDQEQRC 746

  Fly   177 EVDAVPTGMMNFRKKTLG--------------GKRT---VSSNFVSPVAQNDNSTSSRSSS---- 220
            |:      :.:..|..||              .|.|   |:.:|...|.:..:|:.||..:    
  Rat   747 EI------LHSVVKNKLGCDISKSPDLDLKCIAKETEAFVARDFTVLVDRAIHSSLSRQQNPTRE 805

  Fly   221 ----------------IPPALAHLDSKMVDHILGESMHDFKPVAWEDIAGLESAKSTFLEAIIMP 269
                            :|.:|.::           ::|..:.:.|:.|.||...:...::.|.:|
  Rat   806 GLTLTTADFQKALRGFLPASLRNV-----------NLHKPRDLGWDKIGGLHEVRQILMDTIQLP 859

  Fly   270 LRRPDLFTGVRCPPR-GVLLFGPPGTGKTLIAKSIASQAKAKFFSINPSSLTSKWVGDAEKLVKT 333
            .:.|:||..:....| |:||:|||||||||:|..:|.::...|.||....|.||::|.:|:.|:.
  Rat   860 AKYPELFANLPIRQRTGILLYGPPGTGKTLLAGVVARESGMNFISIQGPELLSKYIGASEQAVRD 924

  Fly   334 LFAVAAAHQPAIIFIDEVDSLLSKRSANENESTLRLKNEFLIHLDGAASNEEIRVLVIGATNRPQ 398
            :|..|.|.:|.|:|.||.:|:..:|..:....|.|:.|:.|..|||....:  .|.|:.||:||.
  Rat   925 VFIRAQAAKPCILFFDEFESIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQ--GVYVLAATSRPD 987

  Fly   399 ELDEAVRR--RFVRRLYVPLPTREARQKIIEKLIHQ--VKHNLDVRQVIELAELTDGYSGADVDT 459
            .:|.|:.|  |..:.:|.|.|.:.:|.:|:..|...  :..::|::.|   |.:|:.::|||:..
  Rat   988 LIDPALLRPGRLDKCVYCPPPDQVSRLEILTVLSKSLPLADDVDLQHV---ASVTESFTGADLKA 1049

  Fly   460 LCRYASMAPLRSLTPDQMEVIETHQLP 486
            |...|           |:|.::...||
  Rat  1050 LLYNA-----------QLEALQGRLLP 1065

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FignNP_001259995.1 AAA 282..418 CDD:214640 53/138 (38%)
AAA 286..416 CDD:278434 50/131 (38%)
Vps4_C <480..520 CDD:286426 2/7 (29%)
Pex1NP_001102690.1 PEX-2N 19..98 CDD:286362
PEX-1N 104..179 CDD:286361
AAA 591..741 CDD:214640 34/188 (18%)
AAA 595..724 CDD:278434 30/164 (18%)
AAA 877..1009 CDD:214640 51/133 (38%)
AAA 877..1006 CDD:278434 50/130 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0464
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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