DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fign and Pex1

DIOPT Version :9

Sequence 1:NP_001259995.1 Gene:Fign / 33544 FlyBaseID:FBgn0031519 Length:523 Species:Drosophila melanogaster
Sequence 2:NP_652016.1 Gene:Pex1 / 45460 FlyBaseID:FBgn0013563 Length:1006 Species:Drosophila melanogaster


Alignment Length:565 Identity:141/565 - (24%)
Similarity:226/565 - (40%) Gaps:129/565 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 RLQACESMEKAMKERCQ----------KKITMSR-----RTKRGITHAGYLFEMPHNS------- 79
            |:..|.|.:.::..:|.          |.:.:.|     ..|....|    ||..|.|       
  Fly   463 RMNLCLSADNSVMRQCNVLLAGASGTGKTVLVERILDQLSRKPDYCH----FEFFHGSRSKGRKT 523

  Fly    80 -VFEPECRGFYESCQQTEMASSDLQAPALEVSSTYPV---QQAVKSRPEGQF------------- 127
             ..:.:.|..:.||.|        .|||:.|.....|   ....:|..:|::             
  Fly   524 ESIQKDLRNIFTSCLQ--------HAPAIVVLENLDVLAHAAGEQSSQDGEYYNRMADTVYQLIV 580

  Fly   128 PESRNNSTKKI----DAQQYSSESSSQSG-FGFRT---------AREQLIMDELKKKNRQATSEV 178
            ..:.||:...|    :.|..:...||..| ..|:|         |..::|:.||       .|.:
  Fly   581 QYTTNNAIAVIATVNELQTLNKRLSSPRGRHVFQTVARLPNLERADREIILREL-------CSHI 638

  Fly   179 D-AVPTGMMNFRKKTLGGKRTVSSNFV-------------SPVAQNDNSTSSRSSSIPPALAHLD 229
            : |....::.|...|.|.::.....||             .|:..||....|        |.|.:
  Fly   639 NVAKDLDLVKFSNLTEGYRKCDLVQFVERAIFYAYRISKTQPLLTNDQLIES--------LEHTN 695

  Fly   230 SKMVDHILGESM----HDFKPVAWEDIAGLESAKSTFLEAIIMPLRRPDLFTGVRCPPR---GVL 287
            |..:..|.....    .|...:..|::.||||......|.::.|.|.|.:|..  .|.|   |||
  Fly   696 SYCLQGIQSNQRTGNDADANEMRVEELPGLESVVGVLEEVLMWPSRYPTIFNA--SPLRNQAGVL 758

  Fly   288 LFGPPGTGKTLIAKSIASQAKAKFFSINPSSLTSKWVGDAEKLVKTLFAVAAAHQPAIIFIDEVD 352
            |:||||||||.:...:|:....:..|:....|.:|::|.:|:.|:.||..|.:.:|.::|.||.|
  Fly   759 LYGPPGTGKTYLVSQLATSWNLRIISVKGPELLAKYIGQSEENVRNLFNRARSARPCVLFFDEFD 823

  Fly   353 SLLSKRSANENESTLRLKNEFLIHLDGAASNEEIRVLVIGATNRPQELDEAVRR--RFVRRLYVP 415
            ||..||..:....|.|:.|:.|..|||....:  .|.||.||:||:.||.|:.|  |..|.:..|
  Fly   824 SLAPKRGHDSTGVTDRVVNQLLTELDGVEGLQ--GVTVIAATSRPELLDPALLRSGRIDRLVECP 886

  Fly   416 LPTREARQKIIEKLIHQVKHNLDVRQVIE---LAELTDGYSGADVDTLCRYASMAPL-------- 469
            ||...||.:|.|.|    ...|.:.:.::   .|..|..|:|||:.::...|:||.:        
  Fly   887 LPDAPARVRIFEAL----SSTLSLDECVDFDWFAGKTANYTGADIQSILTSANMAAVKEALAQFG 947

  Fly   470 -----RSLTPDQMEVIETHQL--PAVTMDDFKQALRVISKSVSSE 507
                 :.::..|..:||:.|.  |:::..|..:..|..::..:.|
  Fly   948 HEKLAKKISLKQKHLIESFQTTRPSLSASDVAKYHRTYARFTNKE 992

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FignNP_001259995.1 AAA 282..418 CDD:214640 55/140 (39%)
AAA 286..416 CDD:278434 50/131 (38%)
Vps4_C <480..520 CDD:286426 7/30 (23%)
Pex1NP_652016.1 PEX-1N 93..168 CDD:286361
SpoVK 479..974 CDD:223540 134/529 (25%)
P-loop_NTPase 480..604 CDD:304359 23/135 (17%)
AAA 757..887 CDD:278434 50/131 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0464
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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