DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fign and trip13

DIOPT Version :9

Sequence 1:NP_001259995.1 Gene:Fign / 33544 FlyBaseID:FBgn0031519 Length:523 Species:Drosophila melanogaster
Sequence 2:XP_012819902.1 Gene:trip13 / 394836 XenbaseID:XB-GENE-974898 Length:440 Species:Xenopus tropicalis


Alignment Length:336 Identity:87/336 - (25%)
Similarity:137/336 - (40%) Gaps:89/336 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   223 PALAHLDSKMVDHILGESMHDFKPVA-----WEDIAGLESAKSTFLEAIIMPLRRPDLFTGVRCP 282
            |.:..|:.:..|  |..:.|...|.|     |:.:......||..|:.|...:    ||:.....
 Frog   115 PCVESLEEENED--LVAANHWLLPAADFHGLWDSLIYDSEIKSRLLDYIETAM----LFSDKNVD 173

  Fly   283 P------RGVLLFGPPGTGKTLIAKSIASQAK---------AKFFSINPSSLTSKWVGDAEKLVK 332
            .      |.|||.||||||||.:.|::|.:..         .:...||..||.|||..::.|||.
 Frog   174 SNLISWNRVVLLHGPPGTGKTSLCKALAQKLTIRLSYRYRYGQLVEINSHSLFSKWFSESGKLVT 238

  Fly   333 TLFAVAAAHQ-----PAIIF--IDEVDSLLSKRSAN----ENESTLRLKNEFLIHLDGAASNEEI 386
            .:|  ...|:     .|::|  ||||:||.:.|.|:    |....:|:.|..|..:|      .|
 Frog   239 KMF--QKIHELINDKEALVFVLIDEVESLTAARKASRAGTEPSDAIRVVNAVLTQID------HI 295

  Fly   387 R----VLVIGATNRPQELDEAVRRRFVRRLYVPLPTREARQKI----IEKL-----IHQVKHNLD 438
            :    |:::..:|..:::|.|...|...:.|:..|:..|..||    ||:|     |:..:..|.
 Frog   296 KRYPNVVILSTSNLTEKIDVAFTDRADIKQYIGPPSPAAIFKIYLSCIEELMKCQIIYPKQQLLT 360

  Fly   439 VR-----------------QVIELAELTDGYSGADVDTLCRYASMAPLRSLTPDQMEVIETHQLP 486
            :|                 |:.|::..::|.||..:..|...|....|:|              |
 Frog   361 LRDLEIIGFLENNISKLSLQLNEISRKSEGLSGRVLRKLPFLAHALYLQS--------------P 411

  Fly   487 AVTMDDFKQAL 497
            .||::.|..||
 Frog   412 TVTIERFLWAL 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FignNP_001259995.1 AAA 282..418 CDD:214640 48/165 (29%)
AAA 286..416 CDD:278434 47/153 (31%)
Vps4_C <480..520 CDD:286426 6/18 (33%)
trip13XP_012819902.1 SpoVK <144..394 CDD:223540 69/261 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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