DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fign and atad1a

DIOPT Version :10

Sequence 1:NP_608763.2 Gene:Fign / 33544 FlyBaseID:FBgn0031519 Length:523 Species:Drosophila melanogaster
Sequence 2:NP_001004640.1 Gene:atad1a / 368672 ZFINID:ZDB-GENE-030616-593 Length:380 Species:Danio rerio


Alignment Length:276 Identity:103/276 - (37%)
Similarity:162/276 - (58%) Gaps:27/276 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   247 VAWEDIAGLESAKSTFLEAIIMPLRRPDLFTGVRC--PPRGVLLFGPPGTGKTLIAKSIASQAKA 309
            |.|.|:|||:...|...:.:|:|.::..||:|.:.  ||:||||:||||.|||||||:.|..:..
Zfish    91 VTWRDVAGLDEIISEMQDTVILPFQKRHLFSGSKLLQPPKGVLLYGPPGCGKTLIAKATAKASGC 155

  Fly   310 KFFSINPSSLTSKWVGDAEKLVKTLFAVAAAHQPAIIFIDEVDSLLSKRSANENESTLRLKNEFL 374
            :|.::..|:||.||.|:::||...:|::|...||.|||:||:||.|..||:.::|:|..:|.:|:
Zfish   156 RFINLQASTLTDKWYGESQKLTAAVFSLAVKIQPCIIFLDEIDSFLRNRSSMDHEATAMMKAQFM 220

  Fly   375 IHLDGAASNEEIRVLVIGATNRPQELDEAVRRRFVRRLYVPLPTREARQKIIEKLIHQVKHNLDV 439
            ...||..:.|..:|:|:|||||||::|.|:.||.....:|.||....|::|: :||...::..:.
Zfish   221 SLWDGLDTGENSQVMVMGATNRPQDVDAAILRRMPTAFHVGLPNAAQREEIL-RLILSGENLSNA 284

  Fly   440 RQVIELAELTDGYSGADVDTLCRYASMAPLRSLTPDQM--------------EVIETHQLPAVT- 489
            ..:.|:|..::||||:|:..|||.|:|..:|.....|.              |.:::.||..|| 
Zfish   285 INLKEIASQSEGYSGSDLKELCRDAAMYRVRDYVRKQQMKQIAQQFQLDEEEEHVDSRQLRPVTQ 349

  Fly   490 ---------MDDFKQA 496
                     |.:.|||
Zfish   350 LDLLFGLDKMRESKQA 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FignNP_608763.2 PH-like <4..50 CDD:473070
P-loop containing Nucleoside Triphosphate Hydrolases 229..414 CDD:476819 73/168 (43%)
AAA_lid_3 444..495 CDD:465537 20/74 (27%)
Vps4_C <480..520 CDD:462762 8/27 (30%)
atad1aNP_001004640.1 SpoVK 1..343 CDD:440232 95/252 (38%)
RecA-like_ATAD1 95..260 CDD:410928 71/164 (43%)
Blue background indicates that the domain is not in the aligned region.

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