DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fign and atad1b

DIOPT Version :9

Sequence 1:NP_001259995.1 Gene:Fign / 33544 FlyBaseID:FBgn0031519 Length:523 Species:Drosophila melanogaster
Sequence 2:NP_001019592.1 Gene:atad1b / 368412 ZFINID:ZDB-GENE-030616-44 Length:362 Species:Danio rerio


Alignment Length:312 Identity:105/312 - (33%)
Similarity:184/312 - (58%) Gaps:15/312 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   204 VSPVAQNDNSTSSRSSSIPPALAHLDSKMVDHILGESMHDFKP----VAWEDIAGLESAKSTFLE 264
            :.|..:.......::..:...:...:.|:.::.:..:.|...|    :.|.|||||:...:...:
Zfish    45 IDPTRKQKVEAQKQAEKLMRQIGVQNVKLSEYEMSIAAHLVDPLTMQITWYDIAGLDEVITELKD 109

  Fly   265 AIIMPLRRPDLFTGVRC--PPRGVLLFGPPGTGKTLIAKSIASQAKAKFFSINPSSLTSKWVGDA 327
            .:|:|:::..||.|.|.  ||:||||:||||.|||||||:.|.:|..:|.::.||:||.||.|::
Zfish   110 TVILPIQKRHLFEGSRLLQPPKGVLLYGPPGCGKTLIAKATAKEAGFRFINLQPSTLTDKWYGES 174

  Fly   328 EKLVKTLFAVAAAHQPAIIFIDEVDSLLSKRSANENESTLRLKNEFLIHLDGAASNEEIRVLVIG 392
            :||...:|::|...||:||||||:||.|..||::::|:|..:|.:|:...||..::...:|:::|
Zfish   175 QKLAAAVFSLAIKLQPSIIFIDEIDSFLRNRSSSDHEATAMMKAQFMSLWDGLDTDYNCQVIIMG 239

  Fly   393 ATNRPQELDEAVRRRFVRRLYVPLPTREARQKIIEKLIHQVKHNLDVRQVIELAEL---TDGYSG 454
            ||||||:||.|:.||...|.::..|....|:.|::.::    .|.:|...:||:|:   |||:||
Zfish   240 ATNRPQDLDSAILRRMPTRFHINQPNARQRKDILKLIL----ENENVESAVELSEIAKQTDGFSG 300

  Fly   455 ADVDTLCRYASMAPLRSLTPDQMEVIETHQLPAVTMDDFKQALRVISKSVSS 506
            :|:..:||.|::..:|...  ..|..|...:..:..:|.::|:..:.||.|:
Zfish   301 SDLREMCRDAALLCVRDFV--HQESPEEDFIRPIRQEDLQRAIEKMKKSKSA 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FignNP_001259995.1 AAA 282..418 CDD:214640 64/135 (47%)
AAA 286..416 CDD:278434 61/129 (47%)
Vps4_C <480..520 CDD:286426 6/27 (22%)
atad1bNP_001019592.1 AAA 129..258 CDD:214640 63/128 (49%)
AAA 133..261 CDD:278434 61/127 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170593578
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0464
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.740

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