DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fign and Spata5

DIOPT Version :9

Sequence 1:NP_001259995.1 Gene:Fign / 33544 FlyBaseID:FBgn0031519 Length:523 Species:Drosophila melanogaster
Sequence 2:XP_008759154.1 Gene:Spata5 / 361935 RGDID:1310478 Length:893 Species:Rattus norvegicus


Alignment Length:453 Identity:141/453 - (31%)
Similarity:219/453 - (48%) Gaps:59/453 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 QQTEMASSDLQAPALEVSSTYPVQQAVKSRPEGQFPESRNNSTKKIDAQQYSS--------ESSS 149
            :|:.|.|||       |..::.:.|.....|  |.|.|::...|.|:.:..:.        ..|.
  Rat   219 EQSSMESSD-------VDISFQLSQLDLKEP--QSPASQSTPCKPINDRTMNKAGEVLLDVTQSP 274

  Fly   150 QSGFGFRTAREQLI-----MDELKKKNRQATSEVDAVPTGMMNFRKKTLGGKRTVSSNFVSPVAQ 209
            :.|.|.  ..|::.     .|..|:.|.|..||...:        |.|..|            |:
  Rat   275 RDGSGL--GLEEITGLKCSFDSSKEGNTQPISEEKLL--------KSTSAG------------AK 317

  Fly   210 NDNSTSSRSSSIPPALAHLDSKMVDHILGESMHDFKPVAWEDIAGLESAKSTFLEAIIMPLRRPD 274
            |:..|....||    ...::.:.:.....|....|| |.::.|.||.|......|.|.:||::|:
  Rat   318 NNTDTFYFISS----TTRINLRKICTNSKEQDSQFK-VTYDMIGGLNSQLKAIREIIELPLKQPE 377

  Fly   275 LFTGVRCP-PRGVLLFGPPGTGKTLIAKSIASQAKAKFFSINPSSLTSKWVGDAEKLVKTLFAVA 338
            ||.....| |||:||:||||||||:||:::|::..|....||...:.||:.|:.|..::.:||.|
  Rat   378 LFKSYGIPAPRGLLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEA 442

  Fly   339 AAHQPAIIFIDEVDSLLSKRSANENESTLRLKNEFLIHLDGAAS-NEEIRVLVIGATNRPQELDE 402
            ....|:||||||:|:|..||...::|...|:....|..:||..| ..|.||||:|||||||.||.
  Rat   443 TLRHPSIIFIDELDALCPKREGAQSEVEKRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDA 507

  Fly   403 AVRR--RFVRRLYVPLPTREARQKIIEKLIHQVKHNLDVRQVIELAELTDGYSGADVDTLCRYAS 465
            |:||  ||.:.:.:.:|..:.|..|::||:.:|.|.|...:::.||....||.|||:..||..|.
  Rat   508 ALRRPGRFDKEIEIGIPNAQDRLDILQKLLRRVPHLLTKAELLRLANNAHGYVGADLKALCNEAG 572

  Fly   466 MAPLRSLTPDQMEVIETH--QLPAVTMDDFKQALRVISKSVSSE---DCKQFEAWNEIYGVRH 523
            :..||.:...|..:.::.  .:..:|::||.|.:..|..|...|   |.... :|::|.|:.:
  Rat   573 LYALRRVLRKQPNLPDSKVAGMVKITLNDFLQGMNDIRPSAMREVAIDVPNV-SWSDIGGLEN 634

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FignNP_001259995.1 AAA 282..418 CDD:214640 63/139 (45%)
AAA 286..416 CDD:278434 59/132 (45%)
Vps4_C <480..520 CDD:286426 10/44 (23%)
Spata5XP_008759154.1 CDC48_N 64..132 CDD:304500
SpoVK 370..882 CDD:223540 100/266 (38%)
AAA 390..522 CDD:278434 59/131 (45%)
AAA 664..796 CDD:278434
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0464
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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