DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fign and CG5776

DIOPT Version :10

Sequence 1:NP_608763.2 Gene:Fign / 33544 FlyBaseID:FBgn0031519 Length:523 Species:Drosophila melanogaster
Sequence 2:NP_609585.1 Gene:CG5776 / 34680 FlyBaseID:FBgn0032450 Length:799 Species:Drosophila melanogaster


Alignment Length:517 Identity:140/517 - (27%)
Similarity:240/517 - (46%) Gaps:90/517 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 ESMEKAMKERCQKKITMSR------------RTKRGITHAGYLFEMPHNSVFEPE---CRGFYES 91
            |:|....:||.|..:.:.|            .|::.:   |.:||..:|....|.   ....:..
  Fly   322 EAMCAVAEERSQGHVQLIRINSGEVYSKFLGETEQKL---GAIFERAYNHYPHPTLLLIEDVHNL 383

  Fly    92 CQQTEMASSD---------------LQAPA-LEVSSTYPVQQAVKSRPEGQFPESRNNSTKKIDA 140
            |.:.|  :||               |.:|: |:.|.|:.:  |..|:.:...|..|.  ..::|.
  Fly   384 CPKQE--NSDLVKRVSLAFLSLLDQLSSPSQLKGSKTFVL--ATSSQIDTLHPSIRR--AGRLDN 442

  Fly   141 QQYSSESSSQSGFGFRTAREQLIMDELKKKNRQ-ATSEVDAVPTGMMNFRKKTLGGKRTVSSNFV 204
            :......|||       ||.:::...:|....| :..||:.|               .:::..:|
  Fly   443 EVELGAPSSQ-------ARLEIVRCLIKSVEHQLSDEEVEHV---------------ASITHGYV 485

  Fly   205 -SPVAQNDNSTSSRSSSIPPALAHLD---SKMVDHILGESMHDFKPVAWEDIAGLESAKSTFLEA 265
             :.:|....:...::...|..:.||.   :::....:.|.:.:...|.|.||.|....:....:|
  Fly   486 GADLANLVYAAMLQAQPNPLQMPHLQAALTRIKPSAMREVLIECPNVQWSDIGGQSELRLAMQQA 550

  Fly   266 IIMPLRRPDLF--TGVRCPPRGVLLFGPPGTGKTLIAKSIASQAKAKFFSINPSSLTSKWVGDAE 328
            |..||...|.|  .|:: ||||:|:|||||..||:|||::|:::|..|.||....|.|.|||::|
  Fly   551 IEWPLLHADKFQRLGIK-PPRGILMFGPPGCSKTMIAKALATESKLNFLSIKGPELFSMWVGESE 614

  Fly   329 KLVKTLFAVAAAHQPAIIFIDEVDSLLSKRSANENEST-----LRLKNEFLIHLDGAASNEEIRV 388
            :.|:.:|..|....|||:|.||:|::..:||..:..|:     .|:..:.|..|||..:.:  .|
  Fly   615 RAVREVFRKARQVAPAIVFFDEIDAIGGERSEGDGSSSGSSVKERVLTQLLTELDGVEALQ--NV 677

  Fly   389 LVIGATNRPQELDEAVRR--RFVRRLYVPLPTREARQKIIEKLIHQVKHNLDVRQVIELAELTDG 451
            .::.|||||..:|:|:.|  |..|.|||.||..|||::|::..:..:..:.|| .:.:|.:||:|
  Fly   678 TIVAATNRPDMIDKALLRPGRIDRILYVGLPQCEARREILKIKLRAMPISNDV-DMEKLVQLTEG 741

  Fly   452 YSGADVDTLCRYASMAPLRSLTPDQMEVIETHQLPAVTMDDFKQALRVISKSVSSEDCKQFE 513
            ||||::..:|..|::..|.          ::.:...|...||:.||:.:....|.|..|.:|
  Fly   742 YSGAEIQAVCHEAALRALE----------QSFEAEDVKWTDFEHALKAVPPRTSPELLKLYE 793

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FignNP_608763.2 PH-like <4..50 CDD:473070 2/7 (29%)
P-loop containing Nucleoside Triphosphate Hydrolases 229..414 CDD:476819 69/196 (35%)
AAA_lid_3 444..495 CDD:465537 14/50 (28%)
Vps4_C <480..520 CDD:462762 9/34 (26%)
CG5776NP_609585.1 CDC48 183..797 CDD:273521 140/517 (27%)

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