DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fign and Fign

DIOPT Version :9

Sequence 1:NP_001259995.1 Gene:Fign / 33544 FlyBaseID:FBgn0031519 Length:523 Species:Drosophila melanogaster
Sequence 2:NP_001099954.1 Gene:Fign / 295649 RGDID:1308174 Length:759 Species:Rattus norvegicus


Alignment Length:467 Identity:151/467 - (32%)
Similarity:248/467 - (53%) Gaps:40/467 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 YESCQQTEMASSDL---QAPALEVSSTYPVQQAVKSRPEGQFPESRNNSTKKIDAQQY----SSE 146
            |:....|.:|.|.|   .|.:|:..:.|...|.......|.:...:..||:   :..|    :|.
  Rat   295 YQGHGLTPIAPSALTNSSASSLKRKAFYMAGQGDMDSSYGNYSYGQQRSTQ---SPMYRMPDNSI 356

  Fly   147 SSSQSGFGF-RTAR---------EQLIMDELKKKNRQATSEVDAVPTGMMNFRKKTLGGKRTVS- 200
            |:|..|.|| |.|.         :||:..|.::|....:|.....|:  .:..|.:||.:.:.| 
  Rat   357 SNSNRGNGFDRNAETSSLAFKPTKQLMPSEQQRKFSSQSSRALTPPS--YSTAKNSLGSRSSESF 419

  Fly   201 SNFVSPVAQND-----------------NSTSSRSSSIPPALAHLDSKMVDHILGESMHDFKPVA 248
            ..:.|||....                 .:.:|.:.|:...|.:.|:.::|.:..|.:....||.
  Rat   420 GKYTSPVMSEHGDDHRQLLAHPIQGPGLRAATSSNHSVDEQLKNTDTHLIDLVTNEIITQGPPVD 484

  Fly   249 WEDIAGLESAKSTFLEAIIMPLRRPDLFTGVRCPPRGVLLFGPPGTGKTLIAKSIASQAKAKFFS 313
            |.|||||:..|:...|.::.|:.|.|.|:|:...||.:|||||.||||||:.:.||||..|.||.
  Rat   485 WSDIAGLDLVKAVIKEEVLWPVLRSDAFSGLTALPRSILLFGPRGTGKTLLGRCIASQLGATFFK 549

  Fly   314 INPSSLTSKWVGDAEKLVKTLFAVAAAHQPAIIFIDEVDSLLSKRSANENESTLRLKNEFLIHLD 378
            |..|.|.:||:|:|||::...|.||...||::||:.::|.|||.:.:.|:....|::.|||:.||
  Rat   550 IAGSGLVAKWLGEAEKIIHASFLVARCRQPSVIFVSDIDMLLSSQVSEEHSPVSRMRTEFLMQLD 614

  Fly   379 GAASNEEIRVLVIGATNRPQELDEAVRRRFVRRLYVPLPTREARQKIIEKLIHQVKHNLDVRQVI 443
            ...::.|.:::||.||::|:|:||::||.|::||.:|||...||.:||.:|:.|..:.|:.::..
  Rat   615 TVLTSAEDQIVVICATSKPEEIDESLRRYFMKRLLIPLPDSTARHQIIVQLLSQHNYCLNDKEFA 679

  Fly   444 ELAELTDGYSGADVDTLCRYASMAPLRSLTPDQMEVIETHQLPAVTMDDFKQALRVISKSVSSED 508
            .|.:.|:|:||.||..||:.|::.||.::....:..|...||..:|..||:.|...|..|:|.::
  Rat   680 LLVQRTEGFSGLDVAHLCQEAAVGPLHAMPATDLSAIMPSQLRPITYQDFENAFCKIQPSISQKE 744

  Fly   509 CKQFEAWNEIYG 520
            ...:..||:::|
  Rat   745 LDMYVEWNKMFG 756

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FignNP_001259995.1 AAA 282..418 CDD:214640 63/135 (47%)
AAA 286..416 CDD:278434 59/129 (46%)
Vps4_C <480..520 CDD:286426 12/39 (31%)
FignNP_001099954.1 AAA 519..654 CDD:214640 52/134 (39%)
AAA 522..652 CDD:278434 50/129 (39%)
Vps4_C <723..756 CDD:286426 1/4 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166351758
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0464
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 334 1.000 Inparanoid score I2327
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1176820at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm45286
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23074
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1766
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.900

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