DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fign and VPS4A

DIOPT Version :10

Sequence 1:NP_608763.2 Gene:Fign / 33544 FlyBaseID:FBgn0031519 Length:523 Species:Drosophila melanogaster
Sequence 2:NP_037377.1 Gene:VPS4A / 27183 HGNCID:13488 Length:437 Species:Homo sapiens


Alignment Length:370 Identity:137/370 - (37%)
Similarity:205/370 - (55%) Gaps:48/370 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   189 RKKTLGGKRTVSSNFVSPVAQNDNSTSSRSSSIPPALAHLDSKMVDHILGESMHDFKPVAWEDIA 253
            |.|...||:.|..|    .::...|.|......|.     ..|:.:.::|..:.:...:.|.|:|
Human    75 RSKEKHGKKPVKEN----QSEGKGSDSDSEGDNPE-----KKKLQEQLMGAVVMEKPNIRWNDVA 130

  Fly   254 GLESAKSTFLEAIIMPLRRPDLFTGVRCPPRGVLLFGPPGTGKTLIAKSIASQA-KAKFFSINPS 317
            |||.||....||:|:|::.|.||||.|.|.||:||||||||||:.:||::|::| .:.|||::.|
Human   131 GLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSVSSS 195

  Fly   318 SLTSKWVGDAEKLVKTLFAVAAAHQPAIIFIDEVDSLLSKRSANENESTLRLKNEFLIHLDGAAS 382
            .|.|||:|::|||||.||.:|..|:|:||||||||||...|:.||:|:..|:|.|||:.:.|..:
Human   196 DLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNENESEAARRIKTEFLVQMQGVGN 260

  Fly   383 NEEIRVLVIGATNRPQELDEAVRRRFVRRLYVPLPTREARQKIIEKLIHQVKHNLDVRQVIELAE 447
            |.: ..||:||||.|..||.|:||||.:|:|:|||...||.::....:....|||....:.|||.
Human   261 NND-GTLVLGATNIPWVLDSAIRRRFEKRIYIPLPEEAARAQMFRLHLGSTPHNLTDANIHELAR 324

  Fly   448 LTDGYSGADVDTLCRYASMAPLRSL-------------------------------TPDQMEV-- 479
            .|:||||||:..:.|.:.|.|:|.:                               .|..||:  
Human   325 KTEGYSGADISIIVRDSLMQPVRKVQSATHFKKVCGPSRTNPSMMIDDLLTPCSPGDPGAMEMTW 389

  Fly   480 --IETHQL--PAVTMDDFKQALRVISKSVSSEDCKQFEAWNEIYG 520
              :...:|  |.|.|.|..::|.....:|:::|..:.:.::|.:|
Human   390 MDVPGDKLLEPVVCMSDMLRSLATTRPTVNADDLLKVKKFSEDFG 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FignNP_608763.2 PH-like <4..50 CDD:473070
P-loop containing Nucleoside Triphosphate Hydrolases 229..414 CDD:476819 92/185 (50%)
AAA_lid_3 444..495 CDD:465537 22/87 (25%)
Vps4_C <480..520 CDD:462762 9/41 (22%)
VPS4ANP_037377.1 Interaction with CHMP1B 1..84 4/8 (50%)
PTZ00454 4..348 CDD:240423 123/282 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 75..106 9/39 (23%)
RecA-like_VPS4 121..291 CDD:410929 90/170 (53%)
Vps4_C 374..434 CDD:462762 12/59 (20%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.