DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fign and Katna1

DIOPT Version :9

Sequence 1:NP_001259995.1 Gene:Fign / 33544 FlyBaseID:FBgn0031519 Length:523 Species:Drosophila melanogaster
Sequence 2:NP_035965.2 Gene:Katna1 / 23924 MGIID:1344353 Length:493 Species:Mus musculus


Alignment Length:445 Identity:146/445 - (32%)
Similarity:247/445 - (55%) Gaps:55/445 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 TEMASSDLQAPALEVSSTYPVQQAVKSRPEGQFPESR-NNSTKKIDAQQYSSESSS------QSG 152
            |.:.::..:.||.| ...:.:...|:.||   .|..| ..|::..|.:.:|:..|:      .|.
Mouse    83 TSLQAAQHEFPAAE-GEVWSLPVPVERRP---LPGPRKRQSSQHSDPKPHSNRPSTVVRAHRPSP 143

  Fly   153 FGFRTAREQLIMDELKKKNRQATSEVDAVPTGMMNFRKKTLGGKRTVSSNFVSPVAQNDNSTSSR 217
            ......|.:.:....||:..:...|.:.:|..:                  ..|.|...:.|.  
Mouse   144 QNLHNDRGKAVRSREKKEQSKGREEKNKLPAAV------------------TEPEANKFDGTG-- 188

  Fly   218 SSSIPPALAHLDSKMVDHILGESMHDFKPVAWEDIAGLESAKSTFLEAIIMPLRRPDLFTGVRCP 282
                      .|..:|:.:..:.:.....|.|.|||.|..||....||:::|:..|:.|.|:|.|
Mouse   189 ----------YDKDLVEALERDIISQNPNVRWYDIADLVEAKKLLQEAVVLPMWMPEFFKGIRRP 243

  Fly   283 PRGVLLFGPPGTGKTLIAKSIASQAKAKFFSINPSSLTSKWVGDAEKLVKTLFAVAAAHQPAIIF 347
            .:|||:.|||||||||:||::|::.|..||:::.|:||||:.|::||||:.||.:|..:.||.||
Mouse   244 WKGVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIF 308

  Fly   348 IDEVDSLLSKR-SANENESTLRLKNEFLIHLD---GAASNEE--IRVLVIGATNRPQELDEAVRR 406
            |||:||:.|:| ::.|:|::.|:|.|.|:.:|   ||:.|::  ..|:|:.|||.|.::|||:||
Mouse   309 IDEIDSICSRRGTSEEHEASRRMKAELLVQMDGVGGASENDDPSKMVMVLAATNFPWDIDEALRR 373

  Fly   407 RFVRRLYVPLPTREARQKIIEKLIHQVKHNLDVRQVIELAELTDGYSGADVDTLCRYASMAPLR- 470
            |..:|:|:|||:.:.|::::...:.:::...|| .:..:||..:||||||:..:||.||:..:| 
Mouse   374 RLEKRIYIPLPSAKGREELLRISLRELELADDV-NLASIAENMEGYSGADITNVCRDASLMAMRR 437

  Fly   471 ---SLTPDQMEVI--ETHQLPAVTMDDFKQALRVISKSVSSEDCKQFEAWNEIYG 520
               .|||:::..:  |...:| .||:||:.||:.||||||:.|.:::|.|...:|
Mouse   438 RIEGLTPEEIRNLSREAMHMP-TTMEDFEMALKKISKSVSAADIERYEKWIVEFG 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FignNP_001259995.1 AAA 282..418 CDD:214640 69/141 (49%)
AAA 286..416 CDD:278434 65/135 (48%)
Vps4_C <480..520 CDD:286426 17/41 (41%)
Katna1NP_035965.2 AAA 243..384 CDD:214640 68/140 (49%)
AAA 247..383 CDD:278434 65/135 (48%)
Vps4_C <458..491 CDD:286426 16/33 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167848177
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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