DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fign and mac-1

DIOPT Version :9

Sequence 1:NP_001259995.1 Gene:Fign / 33544 FlyBaseID:FBgn0031519 Length:523 Species:Drosophila melanogaster
Sequence 2:NP_496814.1 Gene:mac-1 / 174974 WormBaseID:WBGene00003119 Length:813 Species:Caenorhabditis elegans


Alignment Length:428 Identity:125/428 - (29%)
Similarity:205/428 - (47%) Gaps:66/428 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 ESSSQSGFGFRTAREQLIMDELKKKNRQ---ATSEVDAVPTGMMNFRKKTL---GGKRTVSSNFV 204
            |:....|....||||: |::::.|.|..   ...::..:..|.:....:.|   ..|..:...|.
 Worm   394 ENEISLGIPDETAREK-ILEKICKVNLAGDVTLKQIAKLTPGYVGADLQALIREAAKVAIDRVFD 457

  Fly   205 SPVAQNDNSTSSRSSSI----------------PPALAHLDSKMVDHILGESMHDFK-------- 245
            :.|.:|:...:.....|                |.||:.|:..     |..|..||:        
 Worm   458 TIVVKNEGHKNLTVEQIKEELDRVLAWLQGDDDPSALSELNGG-----LQISFEDFERALSTIQP 517

  Fly   246 -----------PVAWEDIAGLESAKSTFLEAIIMPLRRPDLFT--GVRCPPRGVLLFGPPGTGKT 297
                       .|:|:||..|...:.....:|:.|::|.|.|.  |:.|.|:|:||.||||.|||
 Worm   518 AAKREGFATVPDVSWDDIGALVEVRKQLEWSILYPIKRADDFAALGIDCRPQGILLCGPPGCGKT 582

  Fly   298 LIAKSIASQAKAKFFSINPSSLTSKWVGDAEKLVKTLFAVAAAHQPAIIFIDEVDSLLSKRSANE 362
            |:||::|::....|.|:....|.:.:||::|:.|:|:|..|...||.:||.||:|:|:.|||..|
 Worm   583 LLAKAVANETGMNFISVKGPELLNMYVGESERAVRTVFQRARDSQPCVIFFDEIDALVPKRSHGE 647

  Fly   363 NESTLRLKNEFLIHLDGAASNEEIRVLVIGATNRPQELDEAVRR--RFVRRLYVPLPTREARQKI 425
            :....||.|:.|..:||....:  :|.:|||||||..:|.|:.|  |..:.|:|..|:.|.|..|
 Worm   648 SSGGARLVNQLLTEMDGVEGRQ--KVFLIGATNRPDIVDAAILRPGRLDKILFVDFPSVEDRVDI 710

  Fly   426 IEKLIH-----QVKHNLDVRQVIELAELTDGYSGADVDTLCRYASMAPLRSLTPDQMEVIETHQ- 484
            :.|...     .:..::|..::.:|.||. |::|||:..|...:|:..|      |..|:|..: 
 Worm   711 LRKSTKNGTRPMLGEDIDFHEIAQLPELA-GFTGADLAALIHESSLLAL------QARVLENDES 768

  Fly   485 LPAVTMDDFKQALRVISKSVSSEDCKQFEAWNEIYGVR 522
            :..|.|..|::|...|..||:..|.|::|...:|||::
 Worm   769 VKGVGMRHFREAASRIRPSVTEADRKKYEHMKKIYGLK 806

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FignNP_001259995.1 AAA 282..418 CDD:214640 57/137 (42%)
AAA 286..416 CDD:278434 55/131 (42%)
Vps4_C <480..520 CDD:286426 12/40 (30%)
mac-1NP_496814.1 Nucleolin_bd 5..65 CDD:318849
TIP49 <191..804 CDD:332389 123/424 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0464
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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