Protein Alignment Fign and cdc-48.3

DIOPT Version :10

• Sequence 1: NP_608763.2
• Gene: Fign / 33544
• FlyBaseID: FBgn0031519
• Length: 523
• Species: Drosophila melanogaster
• Sequence 2: NP_492211.1
• Gene: cdc-48.3 / 172586
• WormBaseID: WBGene00010562
• Length: 724
• Species: Caenorhabditis elegans
• Alignment Length: 276
• Identity: 104/276 - (37%)
• Similarity: 157/276 - (56%)
• Gaps: 21/276 - (7%)

  Fly   247 VAWEDIAGLESAKSTFLEAIIMPLRRPDLFT--GVRCPPRGVLLFGPPGTGKTLIAKSIASQAKA 309
            |:|.||.|.|..|....:|:|.|.:.|:.|.  |:. ||.|:||:||||..|||||:::||:||.
 Worm   456 VSWNDIGGNEELKLEIQQAVIWPQKHPEAFERFGID-PPAGILLYGPPGCSKTLIARALASEAKM 519

  Fly   310 KFFSINPSSLTSKWVGDAEKLVKTLFAVAAAHQPAIIFIDEVDSLLSKRSANENESTL-RLKNEF 373
            .|.::....|.||||||:||.::.||:.|....|.|:|.||:|::.|.|.:.::.... |:..:.
 Worm   520 NFLAVKGPELFSKWVGDSEKAIRDLFSRARQVAPTIVFFDEIDAVGSSRGSEKSSGVSDRVLAQL 584

  Fly   374 LIHLDGAASNEEIRVLVIGATNRPQELDEAVRR--RFVRRLYVPLPTREARQKIIEKLIHQVKHN 436
            |..|||...:.  ||:::.|||||.:||.|:.|  |..|.:||.||....|:.|:|....::|.:
 Worm   585 LTELDGLEKSS--RVILLAATNRPDQLDSALLRPGRLDRAIYVGLPCEVTRRAILEMRTKKMKFD 647

  Fly   437 LDVRQVIELAELTDGYSGADVDTLCRYASMAPLRSLTPDQMEVIETHQLPAVTMDDFKQALRVIS 501
            ..||.:.:|.|.|.|||||::..:||.|:|..:|. :.|...|..||         |:|||..:
 Worm   648 DTVRTIDKLVEKTSGYSGAELVAVCRTAAMFAMRE-SIDATIVQWTH---------FEQALAAV- 701

  Fly   502 KSVSSEDCKQFEAWNE 517
              ||..:....|.:::
 Worm   702 --VSRTEAYLLEIYDD 715

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Fign	NP_608763.2	PH-like	<4..50	CDD:473070
		P-loop containing Nucleoside Triphosphate Hydrolases	229..414	CDD:476819	70/171 (41%)
		AAA_lid_3	444..495	CDD:465537	18/50 (36%)
		Vps4_C	<480..520	CDD:462762	9/38 (24%)
cdc-48.3	NP_492211.1	CDC48	<247..720	CDD:273521	104/276 (38%)