DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fign and atad1

DIOPT Version :9

Sequence 1:NP_001259995.1 Gene:Fign / 33544 FlyBaseID:FBgn0031519 Length:523 Species:Drosophila melanogaster
Sequence 2:NP_001135501.1 Gene:atad1 / 100216041 XenbaseID:XB-GENE-5779938 Length:360 Species:Xenopus tropicalis


Alignment Length:311 Identity:101/311 - (32%)
Similarity:183/311 - (58%) Gaps:11/311 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   204 VSPVAQNDNSTSSRSSSIPPALAHLDSKMVDHILGESMHDFKP----VAWEDIAGLESAKSTFLE 264
            :.|..:.......::..:...:...:.|:.::.:..:.|...|    |.|.|||||:...:...:
 Frog    41 IDPTRKQKVEAQKQAEKLMRQIGVKNVKLTEYEMSIAAHLVDPLSMLVTWSDIAGLDDVITDLKD 105

  Fly   265 AIIMPLRRPDLFTGVRC--PPRGVLLFGPPGTGKTLIAKSIASQAKAKFFSINPSSLTSKWVGDA 327
            .:|:|:|:..||...|.  ||:||||:||||.|||:|||:.|.:|..:|.::.||:||.||.|::
 Frog   106 TVILPIRKRYLFENSRLLQPPKGVLLYGPPGCGKTMIAKATAKEAGCRFINLQPSTLTDKWYGES 170

  Fly   328 EKLVKTLFAVAAAHQPAIIFIDEVDSLLSKRSANENESTLRLKNEFLIHLDGAASNEEIRVLVIG 392
            :||...:|::|....|:||||||:||.|..||::::|:|..:|.:|:...||..::...:|:|:|
 Frog   171 QKLAAAVFSLAVKLHPSIIFIDEIDSFLRSRSSSDHEATAMMKAQFMSLWDGLDTDFNCQVIVMG 235

  Fly   393 ATNRPQELDEAVRRRFVRRLYVPLPTREARQKIIEKLI--HQVKHNLDVRQVIELAELTDGYSGA 455
            ||||||:||.|:.||...|.::..|:.:.|:.|::.::  ..|..::|   ::|:|..:||:||:
 Frog   236 ATNRPQDLDTAIMRRMPTRFHINQPSLKQREAILDLILRNESVDSHVD---LMEIARGSDGFSGS 297

  Fly   456 DVDTLCRYASMAPLRSLTPDQMEVIETHQLPAVTMDDFKQALRVISKSVSS 506
            |:..:||.|::..:|....:..|.....::..:...|..:|:..:.:|.|:
 Frog   298 DLKEMCRDAALLCVRDSVNNSSEESPCEEIRPIHQQDLLRAIDKMKRSKSA 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FignNP_001259995.1 AAA 282..418 CDD:214640 63/135 (47%)
AAA 286..416 CDD:278434 60/129 (47%)
Vps4_C <480..520 CDD:286426 4/27 (15%)
atad1NP_001135501.1 AAA 125..254 CDD:214640 62/128 (48%)
AAA 129..257 CDD:278434 60/127 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.