DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3277 and flt3

DIOPT Version :9

Sequence 1:NP_608762.3 Gene:CG3277 / 33543 FlyBaseID:FBgn0031518 Length:789 Species:Drosophila melanogaster
Sequence 2:XP_001921760.3 Gene:flt3 / 566708 ZFINID:ZDB-GENE-050114-4 Length:956 Species:Danio rerio


Alignment Length:1035 Identity:226/1035 - (21%)
Similarity:389/1035 - (37%) Gaps:364/1035 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MHHSTKVPSRIVLILLLVL----VRNAVGQA-PRENATNPTLISLVRSSEKEPEQMESHRYVTGL 60
            ||...|     :|::||||    :::.:.:| ||.:....|    ||.:.:|.:.|.        
Zfish     1 MHLGNK-----LLLVLLVLHWSSLKDGLTEAHPRCDTDGST----VRCTLEETDLMS-------- 48

  Fly    61 SEPIAMEPLTRMRLNPNPDGEITEL------------------TTNVTLYM----EKI------- 96
            |:||.::.         .:|::.|:                  .||.::::    ||:       
Zfish    49 SDPIKLDV---------TEGQVVEIYSACEQNSSNERKCLCYQRTNSSIHLLQCIEKLGNEKYSV 104

  Fly    97 -------------------------------------------PRLQVRW---QDNLPQG----- 110
                                                       |:..:||   .|:..:|     
Zfish   105 ICGNKTVTAVRATQRRPSVPVLKAILKAGSTNLAQLVCTSEGYPKPTLRWYGNSDDAAEGMTSSA 169

  Fly   111 -------TSYNVLVSAVNNSRCPDA-----PCSE---YGIKEKN------------------ASA 142
                   .||...:|...|.:|..:     .|:|   |.:.|||                  .:|
Zfish   170 CKTESTLISYYSYLSKNPNQKCCASNALGEECTEVYHYDLNEKNKQKSQNIIYLKSGQSLLLRAA 234

  Fly   143 ETHSVNLPVNPNLN---VESVDCNYMFGCQYQVIVETSNAMVRRSARVYIPQCLEGKCSCQLAPT 204
            ..|..|..:..:.|   ::.:.....:.....:.:|:.|   ...:.:|:       |:.. ..|
Zfish   235 RKHFKNPGIKWHFNNTVIKGITSLQFYDWTEHLFIESVN---MAHSGLYL-------CTSD-TET 288

  Fly   205 PPKVLAVAKMLSNETISI-----NLSILASE--------------------LLRKEQDSHLHETL 244
            |.......|:..::.|.|     |.||||..                    :...:......||.
Zfish   289 PRNCSTHVKVFEHDQIDILHLNENNSILAKNKTGFCFQSQVFSYPKARCYWITPNQTQIQCDETS 353

  Fly   245 RT---------------YKMQLKINE----------------------------ETNPSLPWGGV 266
            ::               |:|:|:..|                            ||...||    
Zfish   354 QSNFTSTFKLCNTEPGQYQMKLETQEYSVMRNVSLCISDIPKITIRKNSSFTTCETESPLP---- 414

  Fly   267 LKHLMTRVYKLSELNFRATPKGFEGV---------------MKLGLGTQ-LKEKASLSLQAVI-- 313
                :|..:|......:..|:.::.:               .|:|...: ||.:..| ::..|  
Zfish   415 ----VTVSWKTCPSLAKCDPEDWKEIAADQPEFTDSDQFCQKKIGFSRRHLKSEDHL-IKCCITN 474

  Fly   314 IDPTGCEGPRSVTKVPVPANPVLLTEGDSVSNSIIVMSAMLIAIILAGLIMLLLRRRRARTTAKL 378
            :..|||            :..:||   .:.|::..|:..:||.|:...:|.|::..|    ..|.
Zfish   475 VAGTGC------------SEKILL---QTKSHTYYVICFLLIVILFMIIIALIIFIR----VKKP 520

  Fly   379 RKQEQIYIQTFATSAIEM----EDNVNYVD----KYVEKSQVLGLADIFEVPHSAIQIGRMLGEG 435
            :.|.||.:       |:|    :::..|:|    ||..|         :|.|...:::|..||.|
Zfish   521 KYQSQIQM-------IQMIGPNDNDYIYIDFREFKYDLK---------WEFPRENLELGNELGSG 569

  Fly   436 AFGQVHEATAINLRRMRGTTIVAVKQLKPNPKADEVAEYLAEIEMLKGVGTHHNVVSFLGCCTIK 500
            |||.|.:|||..:.:...:..||||.||...:|.|....::|::||..:|.|.|:|:.||.||..
Zfish   570 AFGMVVQATAYGISKPGVSVQVAVKMLKEKHQAVEKEALMSELKMLTHIGHHENIVNLLGACTGS 634

  Fly   501 PPYLMIMEYVNKGNLLSYLRTVRKEASKL------------------RNRNANYTSCRPIMTRTN 547
            .|..:|.::...|:||:||::.|:...|.                  :|||::...........|
Zfish   635 GPIYLIFQFCCNGDLLNYLKSNRECFHKYLTDAFNKDRFRGLYHNFQQNRNSSEYVLSDNSQCLN 699

  Fly   548 STSSPKSQSVNYIELKASSQTIEMPQEDSTAHMNGIRQPHPSFAETTYTIVEDEDAFEYILDNKE 612
            .|.:.|.|......|.:||.:...|.|:                     ::|.||..:    .:|
Zfish   700 VTPASKEQENENDALLSSSISSGSPAEE---------------------MLECEDEHQ----EEE 739

  Fly   613 LH--------NFALQIANGMRFLEEQEITHRDLAARNVLIDSNKTLKISDFGLSR-------HGI 662
            ||        :|:.|:|.||:||..:...||||||||||:...:.:||:||||:|       :.:
Zfish   740 LHSLTYDDLLSFSFQVAKGMQFLSAKNCIHRDLAARNVLVTHGRQVKIADFGLARDIEHDSNYVV 804

  Fly   663 YTNTRTRKLPLRWLSIEAIRENVYSSKSDIWAYGVVLWEIGTLGASPYPTIS-NDELIPFLMAGN 726
            ..|.|   ||::|::.|:|.:.:|:.:|||||||::||||.:||.:|||.:: |:.....:.:|.
Zfish   805 RGNVR---LPVKWMAPESIFKGIYTMESDIWAYGILLWEIFSLGVTPYPGVTVNNTFYRMIESGY 866

  Fly   727 RLERPEICTPQVYTIMLQCWLEEPEERPTFDALYKVLSPKTT------YVDINSLSDDYV 780
            .||:|......||.:|.:||...|.:||.|..:...:..:..      |.::...|.|.:
Zfish   867 HLEQPYYAAESVYKVMCRCWALNPVDRPCFSKIVAFMEKELAALEERLYYNVGGYSHDEI 926

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3277NP_608762.3 STYKc 426..763 CDD:214568 119/370 (32%)
PTKc 430..763 CDD:270623 118/366 (32%)
flt3XP_001921760.3 IGc2 225..283 CDD:197706 7/67 (10%)
PKc_like 522..907 CDD:328722 131/428 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0200
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR24416
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.910

Return to query results.
Submit another query.