DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3277 and Cad96Ca

DIOPT Version :9

Sequence 1:NP_608762.3 Gene:CG3277 / 33543 FlyBaseID:FBgn0031518 Length:789 Species:Drosophila melanogaster
Sequence 2:NP_651349.1 Gene:Cad96Ca / 43026 FlyBaseID:FBgn0022800 Length:773 Species:Drosophila melanogaster


Alignment Length:621 Identity:170/621 - (27%)
Similarity:264/621 - (42%) Gaps:188/621 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   281 NFRATPKGFEGVM--KLGLGTQLKEKASLSLQAVIIDPTGCEGPRSVTKV-PVPAN--------- 333
            |:...|....||.  :.|...|..|:.:.:....|...|    |:|.||: |:.||         
  Fly   227 NYPPPPPNIPGVRGEQSGEEEQPDEEVTPTTPVRISSTT----PKSRTKLTPITANNSTRVESAI 287

  Fly   334 PVLLT--EGDSVSNS----------------IIVMSAMLIAIILAGLIMLLLRRRR---ARTTAK 377
            |...|  .|...:||                ::.:....:||  |.|:..|.|||.   :||..|
  Fly   288 PAETTTPSGGHHNNSSSPITIFSLKSGTIPIVVTVGGFFVAI--AVLLAYLCRRRLCAISRTLKK 350

  Fly   378 LRKQEQI---YIQTFATSAI-----------EMEDNVNYVDKYV--EKSQVLGLA---------- 416
            .:::|::   ..|:..:|.:           :.:..|.:.::||  |:.|.:|:|          
  Fly   351 TKEKEELAKKSNQSQLSSTLTDDSRNSMVMQQWQGPVAFANRYVPWERDQQMGIATSQLSTGVTN 415

  Fly   417 ---------------------------------------------DIFEVPHSAIQIGRMLGEGA 436
                                                         |.:|.|...::...:|||||
  Fly   416 GGVSSPGVPSPGTGEPGSNLGPGCLTGGAGSSGAPENAFAGEANCDRWEFPRYRLKFFNILGEGA 480

  Fly   437 FGQVHEATAINLRRMRGTTIVAVKQLKPNPKADEVAEYLAEIEMLKGVGTHHNVVSFLGCCTIKP 501
            ||||....|.|:....|.|.||||.||.:....:..:.|:|:|::|.:..|.|||..|||||.|.
  Fly   481 FGQVWRCEATNINGNEGITTVAVKTLKESATEVDRKDLLSELEVMKSLEPHINVVHLLGCCTDKD 545

  Fly   502 PYLMIMEYVNKGNLLSYLRTVRKEASKLRNRNANYTSCRPIMTRTNSTSSPKSQSVNYIELKASS 566
            |..:|:||||:|.|.:|||:.|.|                   |....:..||.           
  Fly   546 PTFVILEYVNRGKLQTYLRSSRAE-------------------RHYGNTHGKSN----------- 580

  Fly   567 QTIEMPQEDSTAHMNGIRQPHPSFAETTYTIVEDEDAFEYILDNKELHNFALQIANGMRFLEEQE 631
                                                    :|.:.:|.:|..|:|.||.:|..:.
  Fly   581 ----------------------------------------VLTSCDLTSFMYQVAKGMDYLTSRG 605

  Fly   632 ITHRDLAARNVLIDSNKTLKISDFGLSR----HGIYTNTRTRKLPLRWLSIEAIRENVYSSKSDI 692
            |.||||||||:||..:.|.|::|||.:|    ..||......|||:||::.|::.:|::|.||||
  Fly   606 IIHRDLAARNILITDDHTCKVADFGFARDVITSKIYERKSEGKLPIRWMATESLYDNIFSVKSDI 670

  Fly   693 WAYGVVLWEIGTLGASPYPTISNDELIPFLMAGNRLERPEICTPQVYTIMLQCWLEEPEERPTF- 756
            |::|:::|||.|||::|||.||..:::..:..|.|||:||.|..::|.||..||..:|:|||.| 
  Fly   671 WSFGILMWEIVTLGSTPYPGISAADVMRKVRDGYRLEKPEHCRRELYNIMYYCWSHDPQERPLFA 735

  Fly   757 ---DALYKVLSPKTTYVDINSLSDDYVFPPISENRE 789
               ..|.|:|..:..|:::....|...:..:|.:.|
  Fly   736 EIIQMLDKLLHTEMDYIELERFPDHNYYNIVSLSGE 771

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3277NP_608762.3 STYKc 426..763 CDD:214568 120/344 (35%)
PTKc 430..763 CDD:270623 120/340 (35%)
Cad96CaNP_651349.1 Cadherin_repeat 65..164 CDD:206637
STYKc 470..741 CDD:214568 118/340 (35%)
PTKc 474..742 CDD:270623 118/337 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45455312
Domainoid 1 1.000 165 1.000 Domainoid score I1208
eggNOG 1 0.900 - - E1_KOG0200
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24416
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.840

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