DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3277 and Sdr

DIOPT Version :9

Sequence 1:NP_608762.3 Gene:CG3277 / 33543 FlyBaseID:FBgn0031518 Length:789 Species:Drosophila melanogaster
Sequence 2:NP_001287331.1 Gene:Sdr / 41809 FlyBaseID:FBgn0038279 Length:868 Species:Drosophila melanogaster


Alignment Length:804 Identity:143/804 - (17%)
Similarity:275/804 - (34%) Gaps:258/804 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VPSRIVLILLLVLVRNAVGQAPRENATNPTLI---------SLVRSSEKEPEQMESHRYVTGLSE 62
            :|..|.:.|:|:.:          .|::|.|.         ||..:...:..::::..:|.| ..
  Fly    13 IPISIAVPLILLFL----------GASSPVLASSDDQTACGSLEINKIADLRKLQNCTHVVG-HV 66

  Fly    63 PIAMEPLTRMRLNPNPD---GEITELTTNVTLY-------MEKI-PRLQ-VRWQDNLPQGTSYNV 115
            .:|...||.:..|.:.|   ..:||::..:.:|       ::.| |||: :|.|:.|  ...|::
  Fly    67 RLAYVDLTDVSGNYSLDSLASNVTEISDYLMVYRCTGLISLQSIFPRLRIIRGQELL--FDQYSL 129

  Fly   116 LVSAVNNSRCPDAPCSEYGIKEKNASAETHSVNLPVNPNL-NVESVDCNYMFG------------ 167
            :|....|.|       |.|:.|. ...::..:.:..||.| .||:||..|:.|            
  Fly   130 VVYENRNLR-------ELGLVEL-LRIQSGFIRVESNPLLCFVETVDWIYLMGNATRQHFSLKHN 186

  Fly   168 -----CQYQVIVETSNAMVRRSARVYIPQCLEGKC----SCQLAPTPPKVL------------AV 211
                 |.....:......:|.|:.         :|    :.||.|.||::.            :.
  Fly   187 RPQSQCPLCGSLSADFEFIRNSSE---------RCWNVNTTQLRPQPPRLKDCPIACGLNGCDSA 242

  Fly   212 AKMLSNETI----SINLSILASELLRKEQDSHLHETLRTYKMQLKINEETNPSLPWGGVLKHLMT 272
            .|...:..:    |.|.|:.|:...|.   ..:::.:.:|::..:            ..:.|...
  Fly   243 GKCCDHNCVTGCYSQNCSLCANYQGRM---GCVNQCVASYELNKR------------RCIGHREC 292

  Fly   273 RVYKLSELNFRATPKGFEGVMKLGLGTQLKEKASLSLQAVIIDPTGCEGPRSVTKVPVPANPVLL 337
            |     ||......:|::.|.|.. |.|   |..|..:.:|.....|.|...|...   |:..:|
  Fly   293 R-----ELGRIPLIRGYQCVKKCP-GNQ---KEILVAKGIIHCQVECNGDFHVKSA---ADLEVL 345

  Fly   338 TEGDSVSNSIIVMSAMLIAIILAGLIMLLLRRRRARTTAKLRKQEQIYIQTFATSAIEMEDNVNY 402
            .:..:::.|:.:....:...|:..|...|...:......|:....|:...||.       .|::.
  Fly   346 QDCVTINGSLTIELTNIKEKIVDALENALASVKEITGYLKVIHSAQLMSLTFL-------QNLDA 403

  Fly   403 V--DKYVEKSQVLGLADIFEVPH-------SAIQIGRML----GEGAFGQVHE-----------A 443
            :  ||.||....|.:.:.:.:.|       ..||.|.:.    ....:.::|:           :
  Fly   404 IRGDKLVENKYALYVVNNYHLEHIWPPNHLVIIQRGTLFFHLNPRLCYEKIHQLQGSLKSGENIS 468

  Fly   444 TAINLRRMRGTTIV---AVKQLKPNPKADE--------VAEYL--AEIEMLKGVGTHH------N 489
            .|.......|..::   ||:.|  |||.::        :.:|:  ..:|.|.|...|:      |
  Fly   469 VADVSPNSNGERVICGDAVRSL--NPKVEDLNSTAVRIILDYMDWEGMETLIGYSYHYKEAPVQN 531

  Fly   490 VVSF---LGC------CTIKP------------PY---------LMIMEY---VNKGNLLSYLRT 521
            |..:   .||      ..:.|            ||         |...||   ::..:.:.|.:|
  Fly   532 VTMYDGRHGCGHDNWLMDVVPNQSRRHVISGLKPYTQYAYFVKTLTRTEYHIQIDAYSKIGYFQT 596

  Fly   522 VRKEASK-LRNRNANYTSCRPIM-------------------TRTNSTSSPKSQSVNYIELKASS 566
            :....|. ||...::..|.:.::                   .:.|:|...|.::...:||: ::
  Fly   597 LPDRPSPVLRIYGSSEISSQILLHWWPPRRPNGVIKNYFVTAEKYNATKEAKDKNYVNVELE-NA 660

  Fly   567 QTIEMPQEDSTAHMNGIRQPHPSFAETTYTIVEDEDAFEYILDNKELHNFALQIANGMRFLEEQE 631
            :.|:........:.:|   |.|          :|||.:     |||                  :
  Fly   661 KDIDCECAGVLPYYSG---PQP----------DDEDYY-----NKE------------------Q 689

  Fly   632 ITHRDLAARNVLIDSNKTLKISDF 655
            ||:.|.....:.:..|...:..:|
  Fly   690 ITYEDALPNLIYVSRNHDYRRKEF 713

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3277NP_608762.3 STYKc 426..763 CDD:214568 53/317 (17%)
PTKc 430..763 CDD:270623 50/313 (16%)
SdrNP_001287331.1 Recep_L_domain 58..173 CDD:279382 32/125 (26%)
Furin-like 209..332 CDD:279142 26/155 (17%)
Recep_L_domain 347..461 CDD:279382 19/120 (16%)
FN3 491..578 CDD:214495 16/86 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45455311
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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