DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3277 and Fgfrl1

DIOPT Version :9

Sequence 1:NP_608762.3 Gene:CG3277 / 33543 FlyBaseID:FBgn0031518 Length:789 Species:Drosophila melanogaster
Sequence 2:NP_954545.1 Gene:Fgfrl1 / 360903 RGDID:735156 Length:529 Species:Rattus norvegicus


Alignment Length:217 Identity:42/217 - (19%)
Similarity:71/217 - (32%) Gaps:61/217 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   195 GKCSCQLAPTPPKVLAVAKMLSNETISINLSILASELLRKEQDSHLHETL---------RTYKMQ 250
            ||.:|:              :||...:||.:.....:.|......|..|.         .|...|
  Rat   213 GKYTCR--------------VSNRAGAINATYKVDVIQRTRSKPVLTGTHPVNTTVDFGGTTSFQ 263

  Fly   251 LKINEETNPSLPWGGVLKHLMTRVYKLSELNFRAT-PKGFEGVMKLGLGTQLKEKASLSLQAVII 314
            .|:..:..|.:.|       :.||...||....:| ..|.:..:.|..|..........|..::|
  Rat   264 CKVRSDVKPVIQW-------LKRVEYGSEGRHNSTIDVGGQKFVVLPTGDVWSRPDGSYLNKLLI 321

  Fly   315 -----DPTG---CEGPRS---------VTKVPVPANPVLLTEGDSVSNSI--------IVMSAML 354
                 |..|   |.|..:         :|.:|.|..|     |..|::|.        :|:....
  Rat   322 SRARQDDAGMYICLGANTMGYSFRSAFLTVLPDPKPP-----GPPVAHSSSTTSLPWPVVIGIPA 381

  Fly   355 IAIILAGLIMLLLRRRRARTTA 376
            .|:.:.|.::|.|.:.:.:..|
  Rat   382 GAVFILGTVLLWLCQTKKKPCA 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3277NP_608762.3 STYKc 426..763 CDD:214568
PTKc 430..763 CDD:270623
Fgfrl1NP_954545.1 I-set 29..112 CDD:400151
Ig strand A' 35..38 CDD:409353
Ig strand B 41..50 CDD:409353
Ig strand C 56..61 CDD:409353
Ig strand C' 64..67 CDD:409353
Ig strand D 72..77 CDD:409353
Ig strand E 78..84 CDD:409353
Ig strand F 91..99 CDD:409353
Ig strand G 102..112 CDD:409353
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 117..152
IgI_2_FGFRL1-like 143..234 CDD:409442 7/34 (21%)
Ig strand B 164..168 CDD:409442
Ig strand C 177..181 CDD:409442
Ig strand E 200..204 CDD:409442
Ig strand F 214..219 CDD:409442 2/18 (11%)
Ig strand G 227..230 CDD:409442 1/2 (50%)
Ig 242..350 CDD:416386 21/114 (18%)
Ig strand A 242..245 CDD:409353 0/2 (0%)
Ig strand A' 249..253 CDD:409353 0/3 (0%)
Ig strand B 261..268 CDD:409353 2/6 (33%)
Ig strand C 272..279 CDD:409353 2/13 (15%)
Ig strand D 304..309 CDD:409353 1/4 (25%)
Ig strand E 317..322 CDD:409353 0/4 (0%)
Ig strand F 330..338 CDD:409353 3/7 (43%)
Ig strand G 341..349 CDD:409353 0/7 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 405..427
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0200
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.