DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3277 and Y50D4B.6

DIOPT Version :9

Sequence 1:NP_608762.3 Gene:CG3277 / 33543 FlyBaseID:FBgn0031518 Length:789 Species:Drosophila melanogaster
Sequence 2:NP_503375.2 Gene:Y50D4B.6 / 3565593 WormBaseID:WBGene00021745 Length:421 Species:Caenorhabditis elegans


Alignment Length:471 Identity:115/471 - (24%)
Similarity:190/471 - (40%) Gaps:128/471 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   343 VSNSIIVMSAMLIAIILAGLIMLL-----LRRRR----------------ARTTAKLRKQEQIYI 386
            :..:|:|:...::.|.|:.|...:     ||:..                .:|.:.:|:.|.:..
 Worm     2 IDRNILVIFYCIVVIALSVLFYYVWKFYYLRKEEHEETRSLESGIIHSSSQKTPSSVRENESLLQ 66

  Fly   387 QTFATSAIEME-DNVNYVDKYVEKSQVLGLADIFEVPHSAIQIGRM--LGEGAFGQV-----HEA 443
            .......|.:| :.:|.:.|.      |...:.||:..:......:  ||.|.:|:|     |:.
 Worm    67 ANEENVPIGLETEPINAIIKN------LKFDERFEIDVNKFSFYNLSFLGNGYYGKVFKERMHKK 125

  Fly   444 TAINLRRMRGTTIVAVKQLKPNPKADE--VAEYLAEIEMLKGVGTHHNVVSFLGCCTIKPPYLMI 506
            ....|.......:...:.|:|...:::  :.|   |:.::..||.|.|:::.:...... ..|::
 Worm   126 QKNGLDSENSLEVAVKRALRPEDPSEQQLMCE---ELNVMCVVGKHPNILALIRWIRTN-EILIV 186

  Fly   507 MEYVNKGNLLSYLRTVRKEASKLRNRNANYTSCRPIMTRTNSTSSPKSQSVNYIELKASSQTIEM 571
            .|:|.||:|:.|||..|:..:|                                           
 Worm   187 SEFVEKGDLVEYLRARRRYFNK------------------------------------------- 208

  Fly   572 PQEDSTAHMNGIRQPHPSFAETTYTIVEDEDAFEYILDNKELHNFALQIANGMRFLEEQEITHRD 636
                                  ....|||...   :|...:|.:||.||||||:||......|||
 Worm   209 ----------------------DIVCVEDNGR---LLCPTDLLSFAFQIANGMKFLGNVACVHRD 248

  Fly   637 LAARNVLIDSNKTLKISDFGLSR----HGIYTNTRTRKLPLRWLSIEAI-----RENV-YSSKSD 691
            ||.|||.:..|:.::|:||||:|    ...|........|::||:.|..     |||: :.||||
 Worm   249 LALRNVFVKRNRIIRIADFGLARWHENKEYYRKKTDVGFPMKWLAPECFEFEQERENIKFDSKSD 313

  Fly   692 IWAYGVVLWEIGTLGASPYPTIS-----NDELIPFLMAGNRLERPEICTPQVYTIMLQCWLEEPE 751
            ||:|||.|:||.:||.|||..:.     ...|:.::..||:|..||..:.::|..|..||...|:
 Worm   314 IWSYGVCLYEIFSLGVSPYEGLDFRPDYFQGLMKYVRDGNQLPSPEHGSDKIYEFMQSCWNLNPD 378

  Fly   752 ERPTF----DALYKVL 763
            :||.|    |...|:|
 Worm   379 KRPVFSECRDFFQKLL 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3277NP_608762.3 STYKc 426..763 CDD:214568 97/364 (27%)
PTKc 430..763 CDD:270623 97/360 (27%)
Y50D4B.6NP_503375.2 PTKc 109..391 CDD:270623 96/353 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0200
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.