DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3277 and Abl2

DIOPT Version :10

Sequence 1:NP_608762.3 Gene:CG3277 / 33543 FlyBaseID:FBgn0031518 Length:789 Species:Drosophila melanogaster
Sequence 2:NP_001382059.1 Gene:Abl2 / 304883 RGDID:1590898 Length:1182 Species:Rattus norvegicus


Alignment Length:487 Identity:134/487 - (27%)
Similarity:213/487 - (43%) Gaps:130/487 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   330 VPAN---PVLLTEGDSVSNSIIVMSA---MLIAIILAGLIMLLLRRRRARTTAKLRKQEQIY--- 385
            ||:|   ||...|..|..:..:..||   :|.::|....::........:.:..||.:.::|   
  Rat   157 VPSNYITPVNSLEKHSWYHGPVSRSAAEYLLSSLINGSFLVRESESSPGQLSISLRYEGRVYHYR 221

  Fly   386 -----------------------IQTFATSAIEMEDNVNYVDKYVEKSQVLGLA---DIFEVPHS 424
                                   :...:|.|..:...::|......|..|.|::   |.:|:..:
  Rat   222 INTTTDSKVYVTAESRFSTLAELVHHHSTVADGLVTTLHYPAPKCNKPTVYGVSPIHDKWEMERT 286

  Fly   425 AIQIGRMLGEGAFGQVHEATAINLRRMRGTTIVAVKQLKPNPKADEVAEYLAEIEMLKGVGTHHN 489
            .|.:...||.|.:|:|:    :.:.:....| ||||.||.:..  ||.|:|.|..::|.: .|.|
  Rat   287 DITMKHKLGGGQYGEVY----VGVWKKYSLT-VAVKTLKEDTM--EVEEFLKEAAVMKEI-KHPN 343

  Fly   490 VVSFLGCCTIKPPYLMIMEYVNKGNLLSYLRTVRKEASKLRNRNANYTSCRPIMTRTNSTSSPKS 554
            :|..||.||::||:.::.||:..||||.|||                                  
  Rat   344 LVQLLGVCTLEPPFYIVTEYMPYGNLLDYLR---------------------------------- 374

  Fly   555 QSVNYIELKASSQTIEMPQEDSTAHMNGIRQPHPSFAETTYTIVEDEDAFEYILDNKELHNFALQ 619
                           |..:|:.||.:                                |...|.|
  Rat   375 ---------------ECSREEVTAVV--------------------------------LLYMATQ 392

  Fly   620 IANGMRFLEEQEITHRDLAARNVLIDSNKTLKISDFGLSR---HGIYTNTRTRKLPLRWLSIEAI 681
            |::.|.:||::...||||||||.|:..|..:|::||||||   ...||.....|.|::|.:.|::
  Rat   393 ISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL 457

  Fly   682 RENVYSSKSDIWAYGVVLWEIGTLGASPYPTISNDELIPFLMAGNRLERPEICTPQVYTIMLQCW 746
            ..|.:|.|||:||:||:||||.|.|.||||.|...::...|..|.|:|:||.|.|:||.:|..||
  Rat   458 AYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGYRMEQPEGCPPKVYELMRACW 522

  Fly   747 LEEPEERPTFDALYKVLSPKTTYVDINSLSDD 778
            ...|.:||:|...::..  :|.:.| :|:|::
  Rat   523 KWSPADRPSFAETHQAF--ETMFHD-SSISEE 551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3277NP_608762.3 PTKc 430..763 CDD:270623 107/335 (32%)
Abl2NP_001382059.1 SH3_Abl 111..164 CDD:212784 3/6 (50%)
SH2_ABL 169..262 CDD:198189 11/92 (12%)
PTKc_Abl 281..543 CDD:270645 110/352 (31%)
FABD 1063..1182 CDD:197885
Blue background indicates that the domain is not in the aligned region.

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