DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3277 and flt4

DIOPT Version :9

Sequence 1:NP_608762.3 Gene:CG3277 / 33543 FlyBaseID:FBgn0031518 Length:789 Species:Drosophila melanogaster
Sequence 2:NP_571020.2 Gene:flt4 / 30121 ZFINID:ZDB-GENE-980526-326 Length:1368 Species:Danio rerio


Alignment Length:813 Identity:217/813 - (26%)
Similarity:346/813 - (42%) Gaps:195/813 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 VGQAPRENATNPTLISLVRSSEKEPEQMESHRYVTGLSE--PIAMEPLTRMRLNPNP-DGEITEL 85
            ||:...:||:.|.:...:..::...::...:.|||.:.|  .|.|||      :.:| :.::.:|
Zfish   546 VGRVVIQNASVPAMYKCLAENKVGKDERLIYFYVTTIPEGFDIEMEP------SEDPLEQDLVQL 604

  Fly    86 TTNVTLYMEKIPRLQVRWQDNLPQGTSYNVLVSAVNNSRCPDAPCS---EYG-IKEKNASAETHS 146
            ..|...:..:    .:||....||...             |:..|.   :|. ..|...|.:|.|
Zfish   605 KCNADNFTYE----NLRWYRLDPQTVP-------------PELDCKSLHQYATFLEGQLSFQTTS 652

  Fly   147 VNLPVNPNL-NVESVD-CNYMFGCQYQVIVETSNAMVRRSARVYIPQCLEGKCSCQLAPTPPKVL 209
            .|..:..|: |::..| .||:  |:    |:.....|:...|.||               |.|.:
Zfish   653 NNWVLQLNITNIQLQDEGNYV--CE----VQNRRTGVKHCHRKYI---------------PVKAM 696

  Fly   210 AVAKMLSNETISINLSILASELLRKEQDSHLHETLRTYKMQLKINEETNPSLPW----------G 264
            ...:...|.|   |.::..||.|               :|...:.....|.|.|          .
Zfish   697 EAPRYRHNPT---NHTVNVSESL---------------QMNCDVEGTPFPQLSWFKDNQPLHQIS 743

  Fly   265 GVLKHLMTRVYKLSELNFRATPKGFEGVMKLGLGTQLKEKASLSLQAVIIDPTG---CEGPRSVT 326
            |:|         |.:.|                       .:||:|.|..:..|   |.......
Zfish   744 GIL---------LQDSN-----------------------RTLSIQRVREEDAGLYTCSACNQKG 776

  Fly   327 KVPVPANPVLLTEGDSVSNSIIVM-SAMLIAIILAGLIMLLLRRRRARTTAKLRKQEQIYIQTFA 390
            .|...|...::...|..:..|::: ...:|||....|::::.        ..:::.....|:|..
Zfish   777 CVQSSATVSVIGSDDKTNVEIVILIGTGVIAIFFWVLLLVIF--------CNVKRVNPADIKTGY 833

  Fly   391 TSAI------EMEDNVNYVDKYVEKSQVLGLADIFEVPHSAIQIGRMLGEGAFGQVHEATAINLR 449
            .|.|      .:|:...|:.  .:.||       :|:....:::|::||.||||:|.||:.....
Zfish   834 LSIIMDPGEVPLEEQCEYLP--YDSSQ-------WEISRDRLRLGKVLGHGAFGKVIEASIFGHD 889

  Fly   450 RMRGTTIVAVKQLKPNPKADEVAEYLAEIEMLKGVGTHHNVVSFLGCCTIKP--PYLMIMEYVNK 512
            :......||||.||....|.|....::|:::|..:|.|.|||:.||.|| ||  |.::|:||...
Zfish   890 KKSSANTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACT-KPNGPLMVIVEYCKY 953

  Fly   513 GNLLSYLRTVRKEASKLRNRNANYTSCRPIMTRTNSTSSPKSQSVNYIELKASSQTIEMPQEDST 577
            |||.::||..|:.....|:|                  |||:||       ...:.||..|...:
Zfish   954 GNLSNFLRAKREFFLPYRDR------------------SPKTQS-------QVRRMIEAGQASQS 993

  Fly   578 AHMNGIRQPHPSFAETTYTIVEDEDAFEYILDNKELHNFALQIANGMRFLEEQEITHRDLAARNV 642
            .|       .||.:.|....|..:|.::..|..::|..::.|:|.||.||..::..||||||||:
Zfish   994 EH-------QPSTSSTNPPRVTVDDLWKTPLTIEDLICYSFQVARGMEFLASRKCIHRDLAARNI 1051

  Fly   643 LIDSNKTLKISDFGLSR----HGIYTNTRTRKLPLRWLSIEAIRENVYSSKSDIWAYGVVLWEIG 703
            |:..|..:||.||||:|    ...|......:|||:|::.|:|.:.||:|:||:|::||:||||.
Zfish  1052 LLSENNVVKICDFGLARDIYKDPDYVRKGNARLPLKWMAPESIFDKVYTSQSDVWSFGVLLWEIF 1116

  Fly   704 TLGASPYPTISNDE-LIPFLMAGNRLERPEICTPQVYTIMLQCWLEEPEERPTFDALYKVLS--- 764
            :|||||||.|..|| ....|..|.|:..|:..:|::|.|||.||..||.|||||.||.::|.   
Zfish  1117 SLGASPYPGIQIDEDFCKRLKDGTRMRAPDNASPEIYGIMLACWQGEPRERPTFPALVEILGDLL 1181

  Fly   765 -----PKTTYVDINSLSDDYVF------PPISE 786
                 |:..: :::..|:|..|      ||..|
Zfish  1182 QENSLPEIPF-NVSQSSEDDGFSQASSRPPSQE 1213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3277NP_608762.3 STYKc 426..763 CDD:214568 131/343 (38%)
PTKc 430..763 CDD:270623 130/339 (38%)
flt4NP_571020.2 IG_like 258..348 CDD:214653
Ig1_VEGFR 265..350 CDD:143270
IG_like 362..445 CDD:214653
Ig 373..445 CDD:299845
Ig 602..685 CDD:143165 22/105 (21%)
IG 602..678 CDD:214652 21/98 (21%)
I-set 705..786 CDD:254352 21/130 (16%)
IGc2 714..776 CDD:197706 16/108 (15%)
PKc_like 858..1184 CDD:304357 134/365 (37%)
Pkinase_Tyr 866..1177 CDD:285015 131/343 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 978..1007 9/42 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1190..1212 5/22 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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