DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3277 and CSF1R

DIOPT Version :9

Sequence 1:NP_608762.3 Gene:CG3277 / 33543 FlyBaseID:FBgn0031518 Length:789 Species:Drosophila melanogaster
Sequence 2:NP_001275634.1 Gene:CSF1R / 1436 HGNCID:2433 Length:972 Species:Homo sapiens


Alignment Length:465 Identity:143/465 - (30%)
Similarity:229/465 - (49%) Gaps:68/465 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   321 GPRSVTKVPV-------PANPVLLTEGDSVSNSIIVMSAMLIAIILAGLIMLLLRRRRARTTAKL 378
            |..|...:|:       |.:..|.|.        :|::.|.|..:|..|::|||.:.:.:...::
Human   492 GSGSWAFIPISAGAHTHPPDEFLFTP--------VVVACMSIMALLLLLLLLLLYKYKQKPKYQV 548

  Fly   379 RKQEQIYIQTFATSAIEMEDNVNYVDKYVEKSQVLGLADIFEVPHSAIQIGRMLGEGAFGQVHEA 443
            |           ...||..:..:|.  :::.:| |...:.:|.|.:.:|.|:.||.||||:|.||
Human   549 R-----------WKIIESYEGNSYT--FIDPTQ-LPYNEKWEFPRNNLQFGKTLGAGAFGKVVEA 599

  Fly   444 TAINLRRMRGTTIVAVKQLKPNPKADEVAEYLAEIEMLKGVGTHHNVVSFLGCCTIKPPYLMIME 508
            ||..|.:......||||.||....|||....::|::::..:|.|.|:|:.||.||...|.|:|.|
Human   600 TAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 664

  Fly   509 YVNKGNLLSYLRTVRKEASKL---------RNRNANYTSCRPIMTRTNSTSSPKSQSVN-YIELK 563
            |...|:||::||  ||..:.|         .....:|.:...........|...||.|: |:|::
Human   665 YCCYGDLLNFLR--RKAEAMLGPSLSPGQDPEGGVDYKNIHLEKKYVRRDSGFSSQGVDTYVEMR 727

  Fly   564 ASSQTIEMPQEDSTAHMNGIRQPHPSFAETTYTIVEDEDAFEYILDNKELHNFALQIANGMRFLE 628
            ..|.:                 .:.||:|..   ::.||...  |:.::|.:|:.|:|.||.||.
Human   728 PVSTS-----------------SNDSFSEQD---LDKEDGRP--LELRDLLHFSSQVAQGMAFLA 770

  Fly   629 EQEITHRDLAARNVLIDSNKTLKISDFGLSR----HGIYTNTRTRKLPLRWLSIEAIRENVYSSK 689
            .:...|||:||||||:.:....||.||||:|    ...|......:||::|::.|:|.:.||:.:
Human   771 SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQ 835

  Fly   690 SDIWAYGVVLWEIGTLGASPYPTI-SNDELIPFLMAGNRLERPEICTPQVYTIMLQCWLEEPEER 753
            ||:|:||::||||.:||.:|||.| .|.:....:..|.::.:|......:|:||..||..||..|
Human   836 SDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHR 900

  Fly   754 PTFDALYKVL 763
            |||..:...|
Human   901 PTFQQICSFL 910

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3277NP_608762.3 STYKc 426..763 CDD:214568 120/351 (34%)
PTKc 430..763 CDD:270623 118/347 (34%)
CSF1RNP_001275634.1 IG_like 28..85 CDD:214653
ig 207..293 CDD:365836
Ig4_SCFR_like 299..400 CDD:319281
Ig 416..495 CDD:319273 1/2 (50%)
Regulatory juxtamembrane domain 542..574 6/45 (13%)
PTKc_CSF-1R 543..914 CDD:133237 129/406 (32%)
Activation loop 796..818 6/21 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 918..950
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0200
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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