DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3277 and Csk

DIOPT Version :9

Sequence 1:NP_608762.3 Gene:CG3277 / 33543 FlyBaseID:FBgn0031518 Length:789 Species:Drosophila melanogaster
Sequence 2:NP_001291690.1 Gene:Csk / 12988 MGIID:88537 Length:450 Species:Mus musculus


Alignment Length:546 Identity:137/546 - (25%)
Similarity:215/546 - (39%) Gaps:166/546 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   284 ATPKGFEGVMKLGL-GTQLKE----KAS-LSLQAVIIDPTGCEGPRSVTKVP-VPANPVLLTEGD 341
            |.|.|.|.:.|... ||..::    |.. |::.||..||...:....|.:.. :|||.|...||.
Mouse     7 AWPSGTECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGIIPANYVQKREGV 71

  Fly   342 SVSNSIIVM-----------SAMLIAIILAGLIMLLLRRRRART--------------------- 374
            .....:.:|           :..|:.....||.::     |..|                     
Mouse    72 KAGTKLSLMPWFHGKITREQAERLLYPPETGLFLV-----RESTNYPGDYTLCVSCEGKVEHYRI 131

  Fly   375 ---TAKLRKQEQIY-------IQTFATSA-------IE---MEDNVNYVDKYVEKSQVLGLADIF 419
               .:||...|::|       ::.:.|.|       |:   ||..|...|::......|.:.:  
Mouse   132 MYHASKLSIDEEVYFENLMQLVEHYTTDADGLCTRLIKPKVMEGTVAAQDEFYRSGWALNMKE-- 194

  Fly   420 EVPHSAIQIGRMLGEGAFGQVHEATAINLRRMRGTTIVAVKQLKPNPKADEVAEYLAEIEMLKGV 484
                  :::.:.:|:|.||.|      .|...||.. ||||.:|.:..|.   .:|||..::..:
Mouse   195 ------LKLLQTIGKGEFGDV------MLGDYRGNK-VAVKCIKNDATAQ---AFLAEASVMTQL 243

  Fly   485 GTHHNVVSFLGCCTIKPPYLMIM-EYVNKGNLLSYLRTVRKEASKLRNRNANYTSCRPIMTRTNS 548
             .|.|:|..||....:...|.|: ||:.||:|:.|||:        |.|:               
Mouse   244 -RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRS--------RGRS--------------- 284

  Fly   549 TSSPKSQSVNYIELKASSQTIEMPQEDSTAHMNGIRQPHPSFAETTYTIVEDEDAFEYILDNKEL 613
                                                                      :|....|
Mouse   285 ----------------------------------------------------------VLGGDCL 291

  Fly   614 HNFALQIANGMRFLEEQEITHRDLAARNVLIDSNKTLKISDFGLSRHGIYTNTRTRKLPLRWLSI 678
            ..|:|.:...|.:||.....||||||||||:..:...|:|||||::....|.. |.|||::|.:.
Mouse   292 LKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD-TGKLPVKWTAP 355

  Fly   679 EAIRENVYSSKSDIWAYGVVLWEIGTLGASPYPTISNDELIPFLMAGNRLERPEICTPQVYTIML 743
            ||:||..:|:|||:|::|::||||.:.|..|||.|...:::|.:..|.:::.|:.|.|.||.:|.
Mouse   356 EALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMK 420

  Fly   744 QCWLEEPEERPTFDALYKVLSPKTTY 769
            .||..:...||||..|.:.|....|:
Mouse   421 NCWHLDAATRPTFLQLREQLEHIKTH 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3277NP_608762.3 STYKc 426..763 CDD:214568 97/337 (29%)
PTKc 430..763 CDD:270623 97/333 (29%)
CskNP_001291690.1 Interaction with PTPN22. /evidence=ECO:0000269|PubMed:8890164 9..70 17/60 (28%)
SH3_CSK 11..67 CDD:212703 16/55 (29%)
SH2_csk_like 78..175 CDD:198190 14/101 (14%)
PTKc_Csk 188..443 CDD:133213 99/355 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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