DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15406 and ITR1

DIOPT Version :10

Sequence 1:NP_608761.2 Gene:CG15406 / 33542 FlyBaseID:FBgn0031517 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_010785.1 Gene:ITR1 / 852108 SGDID:S000002905 Length:584 Species:Saccharomyces cerevisiae


Alignment Length:502 Identity:111/502 - (22%)
Similarity:191/502 - (38%) Gaps:105/502 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 SLSATLIT---------FCHGIALGWLSPML--------PKLLSPQETPLSFYIDVNEASWLGAV 69
            |||..:||         |..|...|::|..|        .|:|:..|..:     |..|:.|||:
Yeast    81 SLSPFIITLTFVASISGFMFGYDTGYISSALISIGTDLDHKVLTYGEKEI-----VTAATSLGAL 140

  Fly    70 IS--IGGISGNFSFSYLMNRFGRKVSIYALAVPHTCIWFLFYFAQSIEWLYVARVFAGLTGGGMF 132
            |:  ..|.:.:.        ||||..:....:.......|...|.:...:.|.|:..|...|...
Yeast   141 ITSIFAGTAADI--------FGRKRCLMGSNLMFVIGAILQVSAHTFWQMAVGRLIMGFGVGIGS 197

  Fly   133 VVLPIFIGEIADNSIRGRLCSFFTLTMNTGIMVGFVVSSHIAY-----------HVIP------- 179
            ::.|:||.|||...|||||....:|.:..|.:|.:...:.:.|           .:||       
Yeast   198 LIAPLFISEIAPKMIRGRLTVINSLWLTGGQLVAYGCGAGLNYVNNGWRILVGLSLIPTAVQFTC 262

  Fly   180 -CAVVGLPVLYVL----------LATRYPEPPQQLIRWKREEEAEKSLRYYRRCDGPNVSKEEER 233
             |.:...|..||:          |...|.:..:::|    |.:.|:.:...:...|.||   .|:
Yeast   263 LCFLPDTPRYYVMKGDLARATEVLKRSYTDTSEEII----ERKVEELVTLNQSIPGKNV---PEK 320

  Fly   234 AYQKHFDEMRLAIQQQNNDTDDNGLSMSDFLTKRSLKALATGLVLMVANIFTGTFAFNNYMSNIF 298
            .:.        .|::.:.             ...:|:||..|..|.....|||..:...:...||
Yeast   321 VWN--------TIKELHT-------------VPSNLRALIIGCGLQAIQQFTGWNSLMYFSGTIF 364

  Fly   299 DAVHTQLDPNTNTIIIGAVQILGTLASIYLVDRYGRKILLIVSCAGSGIGTSAFGLYAFYAEEQK 363
            :.|..: :.:..:||:.....:.||.:.:.:|:.||:.:|::...|..:......: ||:....|
Yeast   365 ETVGFK-NSSAVSIIVSGTNFIFTLVAFFSIDKIGRRTILLIGLPGMTMALVVCSI-AFHFLGIK 427

  Fly   364 VD-------LSAFSAWLPVTLMAFIIFIA----NVGVISVTMVVLVEILPQKIRAVATSFCLGCL 417
            .|       .|.||:|..|.::..|:|.|    .:|.:....   .|:.||.:|.:.||:.....
Yeast   428 FDGAVAVVVSSGFSSWGIVIIVFIIVFAAFYALGIGTVPWQQ---SELFPQNVRGIGTSYATATN 489

  Fly   418 SFFAFASLKTFPLMMFHLGLAATMWFCAAVSVICLFYVVVCLEETKG 464
            ...:.....||..|:.::..|.|..|.|.:|.:...:...|..|..|
Yeast   490 WAGSLVIASTFLTMLQNITPAGTFAFFAGLSCLSTIFCYFCYPELSG 536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15406NP_608761.2 MFS_GLUT6_8_Class3_like 19..469 CDD:340916 111/502 (22%)
ITR1NP_010785.1 MFS_HMIT_like 92..533 CDD:340918 104/486 (21%)

Return to query results.
Submit another query.