DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15406 and MSS1

DIOPT Version :10

Sequence 1:NP_608761.2 Gene:CG15406 / 33542 FlyBaseID:FBgn0031517 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_198006.1 Gene:MSS1 / 832703 AraportID:AT5G26340 Length:526 Species:Arabidopsis thaliana


Alignment Length:427 Identity:104/427 - (24%)
Similarity:174/427 - (40%) Gaps:76/427 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 IGGISGNFSFSYLMNRFGRKVSIYALAVPHTCIWFLFYF--------AQSIEWLYVARVFAGLTG 128
            :.|::..|..||.....||::::....|        |:.        ||.:..|...|:..|...
plant    92 LAGLTATFFASYTTRTLGRRLTMLIAGV--------FFIIGVALNAGAQDLAMLIAGRILLGCGV 148

  Fly   129 GGMFVVLPIFIGEIADNSIRGRLCSFFTLTMNTGIMVGFVVSSHIAY------HVIPCAVVGLPV 187
            |.....:|:|:.|||...|||.|...|.|.:..||:...:|:...|.      ..:...:.|:|.
plant   149 GFANQAVPLFLSEIAPTRIRGGLNILFQLNVTIGILFANLVNYGTAKIKGGWGWRLSLGLAGIPA 213

  Fly   188 LYV----LLATRYPEPPQQLIRWKREEEAEKSLRYYRRCDGPNVSKEEERAYQKHFDEMRLAIQQ 248
            |.:    ||.|   |.|..|:...|.:|.:..||..|..|  ||..|    :....:..|||.:.
plant   214 LLLTVGALLVT---ETPNSLVERGRLDEGKAVLRRIRGTD--NVEPE----FADLLEASRLAKEV 269

  Fly   249 QNNDTDDNGLSMSDFLTKRSLKALATGLVLMVANIFTGTFAFNNYMSNIFDAVHTQLDPNT-NTI 312
            ::        ...:.|.:|:...|...:.|.:....||..|...|...:|..:....|.:. :.:
plant   270 KH--------PFRNLLQRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFSTLGFGSDASLYSAV 326

  Fly   313 IIGAVQILGTLASIYLVDRYGRKILLIVSCAGSGIGTSAFGLYAFYAE------------EQKVD 365
            :.|||.:|.||.|||.||:.||::||:.:           |:..|:::            :...:
plant   327 VTGAVNVLSTLVSIYSVDKVGRRVLLLEA-----------GVQMFFSQVVIAIILGVKVTDTSTN 380

  Fly   366 LSAFSAWLPVTLMAFII--FIANVGVISVTMVVLVEILPQKIRAVATS--FCLGCLSFFAFASLK 426
            ||...|.|.|.::...:  |..:.|.:.  .::..|..|.:.|:...|  .|:..|  |.|...:
plant   381 LSKGFAILVVVMICTYVAAFAWSWGPLG--WLIPSETFPLETRSAGQSVTVCVNLL--FTFIIAQ 441

  Fly   427 TFPLMMFHLGLAATMWFCAAVSVICLFYVVVCLEETK 463
            .|..|:.|......::|.|.|.::.:| |:..|.|||
plant   442 AFLSMLCHFKFGIFIFFSAWVLIMSVF-VMFLLPETK 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15406NP_608761.2 MFS_GLUT6_8_Class3_like 19..469 CDD:340916 104/427 (24%)
MSS1NP_198006.1 MFS_STP 29..475 CDD:340919 101/423 (24%)

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