DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15406 and itr2

DIOPT Version :10

Sequence 1:NP_608761.2 Gene:CG15406 / 33542 FlyBaseID:FBgn0031517 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_593320.1 Gene:itr2 / 2541827 PomBaseID:SPAC20G8.03 Length:557 Species:Schizosaccharomyces pombe


Alignment Length:501 Identity:114/501 - (22%)
Similarity:197/501 - (39%) Gaps:106/501 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 IFQWQYRRQLLVSLSATLITFCHGI---ALGWLSPMLPKLLSPQETPLSFYIDVNEASWLGAVIS 71
            |..|.:....:..:|..|..:..|:   ||..|...|..:||..:..|     :..|:...|:||
pombe    77 ISSWIWVLSAVAGISGLLFGYDTGVISGALAVLGSDLGHVLSSGQKEL-----ITSATSFAALIS 136

  Fly    72 IGGISGNFSFSYLMNRFGRKVSIYALAVPHTCIWFLFYF-------AQSIEWLYVARVFAGLTGG 129
             ...||     :|.:..|||..:       .|...:|..       ::::..:.|.|...|...|
pombe   137 -ATTSG-----WLADWVGRKRLL-------LCADAIFVIGSVIMAASRNVAMMVVGRFIVGYGIG 188

  Fly   130 GMFVVLPIFIGEIADNSIRGRLCSFFTLTMNTGIMVGFVVSSHIAY-HV-----IPCAVVGLPVL 188
            ...:::|::|.|:|...:||||...:.:.:..|.::.:  |.:.|: ||     |...:...|.|
pombe   189 LTSLIVPMYITELAPARLRGRLVIIYVVFITGGQLIAY--SLNAAFEHVHQGWRIMFGIGAAPAL 251

  Fly   189 YVLLATRY-PEPPQQLIRWKREEEAEKSLRYYRRCDGPNVSKEEERAYQKHFDEMRLAIQQQNND 252
            ..|::..: ||.|:.|:|....|:..|.|....    |. :|..|.||       ::::.|:...
pombe   252 GQLISLFWTPESPRYLLRHNHVEKVYKILSRIH----PE-AKPAEIAY-------KVSLIQEGVK 304

  Fly   253 TD-DNGLSMSDFLTKRSLKALAT----------GLVLMVANIFTGTFAFNNYMSNIFDAVHTQLD 306
            .| ..|.....|.  .|||.|.|          |..|.....|:||.|...:.:.||.:|..: :
pombe   305 VDFPEGNKFQHFF--HSLKVLFTVPSNRRSLFIGCFLQWFQQFSGTNAIQYFSAIIFQSVGFK-N 366

  Fly   307 PNTNTIIIGAVQILGTLASIYLVDRYGRKILLIVSCAG--SGIGTSAFGLYAFYAEEQKVDLSAF 369
            ..:.:|::||...:.|:.:...:||.||:.:|:.:.|.  :|:...|...:...|:..:   :..
pombe   367 SISVSIVVGATNFVFTIVAFMFIDRIGRRRILLCTSAVMIAGLALCAIAYHFLPADTTQ---NTN 428

  Fly   370 SAWLPVTLMAFIIFIAN---------------------------------VG--VISVTMVVLVE 399
            |.|..|.|.:.|||:|:                                 ||  :||.:.:.::|
pombe   429 SGWQYVVLASIIIFLASYASGIGNIPWQQAELFPMEVRALGAGFSTAINWVGNLIISASFLTMME 493

  Fly   400 -ILPQKIRAVATSFCLGCL--SFFAFASLKTFPLMMFHLGLAATMW 442
             |.|....|:...||...|  |:|.:..|....:...|..|....|
pombe   494 SITPTGTFALFAGFCFVGLVTSYFTYPELAGMSIENIHKLLEKGFW 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15406NP_608761.2 MFS_GLUT6_8_Class3_like 19..469 CDD:340916 112/492 (23%)
itr2NP_593320.1 MFS_HMIT_like 87..521 CDD:340918 108/471 (23%)

Return to query results.
Submit another query.