DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9663 and Abcg1

DIOPT Version :9

Sequence 1:NP_608760.2 Gene:CG9663 / 33541 FlyBaseID:FBgn0031516 Length:808 Species:Drosophila melanogaster
Sequence 2:NP_445954.2 Gene:Abcg1 / 85264 RGDID:620294 Length:666 Species:Rattus norvegicus


Alignment Length:754 Identity:274/754 - (36%)
Similarity:416/754 - (55%) Gaps:115/754 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 IKAKSHDAPLAETENTVLSTSESVYGTPLGATPVSSPANQSQRSQASQHSDESRNTSSTATSGGS 133
            :.|.::.|.:.|.::..:|..|          .|||..::.:....:.|..:..|..:.|     
  Rat    14 MNASNYSAAMTEPKSVCVSVDE----------VVSSNVDELETDLLNGHLKKVDNNFTEA----- 63

  Fly   134 IFPHEQYKTIKK---INIGFENIRYTTKFGVFQRET--KDVLMGLTGYFKSGELSAVIGPSGAGK 193
                :::.::.:   :||.|:::.|:...|.:.|:.  |.:|.|::|.|.||||.|::|||||||
  Rat    64 ----QRFSSLPRRAAVNIEFKDLSYSVPEGPWWRKKGYKTLLKGISGKFNSGELVAIMGPSGAGK 124

  Fly   194 STLLNILSGYTTYGFTGDFRVNGNRRDLKAFKSNVAFIRQDTSLQAFLSVKEAMHFAANLKIGTH 258
            |||:|||:||...|..|...:||..|||:.|:....:|.||..|...|:|:|||..:|:||:   
  Rat   125 STLMNILAGYRETGMKGAVLINGMPRDLRCFRKVSCYIMQDDMLLPHLTVQEAMMVSAHLKL--- 186

  Fly   259 MTHSEK----RERVKCILEAIGMYENRHTRTGQLSGGQKKRLAIALELVNNPPVLILDEPTTGLD 319
               .||    ||.||.||.|:|:....:||||.|||||:|||||||||||||||:..||||:|||
  Rat   187 ---QEKDEGRREMVKEILTALGLLPCANTRTGSLSGGQRKRLAIALELVNNPPVMFFDEPTSGLD 248

  Fly   320 SFTSNQLINLLKKLAIEGRTVICTIHQPSALTFAMFDHLYAIGEGKCIYAGGAQNLLPFLGALNL 384
            |.:..|:::|:|.||..||:::||||||||..|.:||.||.:.:|:|:|.|...||:|:|..|.|
  Rat   249 SASCFQVVSLMKGLAQGGRSIVCTIHQPSAKLFELFDQLYVLSQGQCVYRGKVSNLVPYLRDLGL 313

  Fly   385 HCPESYNPADYLMEIATHDYDTAEDNQLEKLVALMDNGR-NEDYRQSKTARVAQLAAMKKVDQLM 448
            :||..:||||::||:|:.:|    .:|..:||..:..|. :.||::                :|.
  Rat   314 NCPTYHNPADFVMEVASGEY----GDQNSRLVRAVREGMCDSDYKR----------------ELG 358

  Fly   449 AAGLITPVTAPVMSTSVPAHFMQGNTFKPLTPINELSSRVWDSQTAGIGNAGSCCKPKKKNKSRP 513
            ..|.:.|.                               :|                     .||
  Rat   359 GDGDVNPF-------------------------------LW---------------------HRP 371

  Fly   514 AIELDPSHL--CKRQNIYATPFYRQLSILLVRTFLLIWRDSSLTTMRFAIHLITGILIGTLYFGI 576
            | |.|.:.:  |   :.::.....|..||..||||.|.|||.||.:|...|:..|:|||.||.||
  Rat   372 A-EEDSASMEGC---HSFSASCLTQFCILFKRTFLSIMRDSVLTHLRITSHIGIGLLIGLLYLGI 432

  Fly   577 GNDAAQTLNIFRYLFYTIMFIMYCAFSGILVKFPLEFPIVSREHFNRWYSLRAYYVAITLADLPI 641
            ||:|.:.|:...:||::::|:|:.|....::.||||..:..|||.|.||||:|||:|.|:||:|.
  Rat   433 GNEAKKVLSNSGFLFFSMLFLMFAALMPTVLTFPLEMSVFLREHLNYWYSLKAYYLAKTMADVPF 497

  Fly   642 QIICSALFIVPTYLMTQQPLELWRFGMFFLIVFVTALVSQSIGLAVGAA-LSLKLGSILGPFFIC 705
            ||:....:....|.||.||.:..||.:|..:..:|:||:||:||.:||| .||::.:.:||....
  Rat   498 QIMFPVAYCSIVYWMTSQPSDAVRFVLFAALGTMTSLVAQSLGLLIGAASTSLQVATFVGPVTAI 562

  Fly   706 PFLQFSGFFLMEKDAPVFLRWMFDISFLKYSLEGATMAIFGYDREPLACN-ELYCHLRHPQFILK 769
            |.|.|||||:.....|.:|:||..||:::|..||..::|:|.|||.|.|: ...||.:..:.||:
  Rat   563 PVLLFSGFFVSFDTIPTYLQWMSYISYVRYGFEGVILSIYGLDREDLHCDIAETCHFQKSEAILR 627

  Fly   770 SLDMANGNYTLALIFLFGVLVFLRILAFYIMSFRLRLFR 808
            .||:.|....|..|.|....:.||::|::::.:::|..|
  Rat   628 ELDVENAKLYLDFIVLGIFFISLRLIAYFVLRYKIRAER 666

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9663NP_608760.2 ABCG_EPDR 145..370 CDD:213180 116/233 (50%)
3a01204 149..808 CDD:273361 260/669 (39%)
ABC2_membrane 540..743 CDD:279410 90/203 (44%)
Abcg1NP_445954.2 3a01204 60..666 CDD:273361 263/696 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166335083
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100076
Panther 1 1.100 - - O PTHR48041
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X52
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
109.710

Return to query results.
Submit another query.